| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1015 |
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| Symbol | |
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| ID | 1182649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 1109641 |
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| End bp | 1110651 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637392396 |
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| Product | integrase/recombinase XerC, putative |
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| Protein accession | NP_790853 |
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| Protein GI | 28868234 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCTCTA TTGCCTCTTA TGAGCACGTG CTTCACCGCT ACCCCAGCGT TCAGCAATGG
CTGGCGCTGC TCGGTAACCT GGGAAGAGCA CCGGCTACCT TGGATGCCTA CGGCAGGGGA
TTGGCGCATT ACTTGCTCCA CTGCGAAGCC TCCGGTCTGG AGGCTGAATC CATCACATTT
GAGCAAGTCA CGCTCTACAT CCGTCGGCTA CTGCCCGGGC AAGAAAACGC GGTGGCGAAT
TCGACCTTGC ACCAGCGCCT CACCGCGATC CGCCTGTGGT ACGACCACCT GGTGTTTCAG
GGGCGTTGCG CACAGAATCC GGTACCTCGC GGCCAGCACG GCCGCCTGTG TCAGATCCCT
GGACATTCAG GGTTTGTGAG AGGGCTGGTG CCTCGCCTGA TAAAGCTGCC CGACATCCCC
ACGGATGAGC AGTGGCGTTA CTTTCTCAGC ATTGCGGCCA GGTCGTCTAT TCGTGATCGA
CTTATGCTCT CGTTGGCGTA CTGCGGTGCG CTCCGTCGTG CCGAACTGGT GGGCCTGAGA
ATCGAAGACC TGGATCTCGC CCATCGACTC ATTTCAGTGC GCGCAGAAAC GACCAAAGGC
CGACGCAGCC GTGTCGTGTG CTACAGCCCT GACATTGCGC CGATACTTGG GACGCATCTT
CATGCCCTTC GTCTGGCCGG TTGGTCGAAA GGAGCCCTGT TTCGATCCGA GTCTGATCGC
AATCGAGGTT CGGCACTCAC GCGGTGGACG TGGAGTAAAA CGGTAGAAAG ATGGGCCAGA
GACTCAAATC TGTCATGCCT TAGCACACAC ACTTTTCGTC ATCTGCGACT CACGCATTTG
GCTCGTGCGG GGTGGAAACT GCATGAGTTG ACGGCCTATG CAGGTCACCG GGATCCGAAG
ACCACCTTGA TTTATGTGCA CCTGTCGGGC GCGGACCTGA CTGCAAGATT GGCGCATTCG
GTGGGTAGTC TGGACGCCCG ACTGTTCGCT GAACTCTTCA AGTCGGAGTA A
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| Protein sequence | MASIASYEHV LHRYPSVQQW LALLGNLGRA PATLDAYGRG LAHYLLHCEA SGLEAESITF
EQVTLYIRRL LPGQENAVAN STLHQRLTAI RLWYDHLVFQ GRCAQNPVPR GQHGRLCQIP
GHSGFVRGLV PRLIKLPDIP TDEQWRYFLS IAARSSIRDR LMLSLAYCGA LRRAELVGLR
IEDLDLAHRL ISVRAETTKG RRSRVVCYSP DIAPILGTHL HALRLAGWSK GALFRSESDR
NRGSALTRWT WSKTVERWAR DSNLSCLSTH TFRHLRLTHL ARAGWKLHEL TAYAGHRDPK
TTLIYVHLSG ADLTARLAHS VGSLDARLFA ELFKSE
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