| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1014 |
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| Symbol | |
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| ID | 1182648 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 1107227 |
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| End bp | 1109509 |
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| Gene Length | 2283 bp |
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| Protein Length | 760 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637392395 |
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| Product | TonB-dependent receptor, putative |
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| Protein accession | NP_790852 |
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| Protein GI | 28868233 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCTTT CCAGGATTCA CCTTGCGTTG GTCGCCGCTG GCATGAGCCA CGGCATGGTC
ATGGCTGACC AGAGTGTGAG TGATGTCGGC ACCATTGGCG TGCAGGGCAA AGCGACTGCC
GGTGGCGGTT ACATGGTTCA GGAGGAAAGC ATCAAGGCGC GTTCCACCGT GACCAAGGAG
GCGCTCGACA AACAGGCTGC CACCGGTAAC GCGATCGACA AGCTCAAGTA CACCCCGGGC
CTGAATATCT CCAGTGAAGA CGCCACCGGT CTTTCGGGCT TCCGTTTTAC CATGCGCGGG
CTCAACTCCG ATCAGGTCGG CATGTCGGTA GACGGCATGC CGATCAATGA CTCCGGCAAC
TACGCGCTGT ATTCCAACTT GTTGGGTGAC CCGGAAAACA TCGATCAGAT ATTCGTCACC
CAAGGCTCTG CCGAAAGCGA TGGCCCGCAT ATCGGTTCCA GCGGCGGCAA CATCGGCATT
GTGACCATTC GGCCCACCAA GGAAACCGGC GCGTTCGTCA AGCAGGTGGC GGGCAGCAAC
GGCACTTACA AGACCTTTGC ACGCCTTAAT ACCGGCGAGA TCAACGGGCT GAGCAACTGG
CTGTCGATGT CTCACACCGA AGGCCAGAAA TGGCGCGGTG ATGGGGCGGT GCGCGCTGAC
AAGGTGGAAT GGAACAGCTT TTTCGACATG GGTTCGGGCA ATACGGCCAA CCTGATTCTC
AAGTATCACG AACAGGACAA CAACAGTTAC AGCCAGCTCA CCAAGAGCCA GTTCCAGCAG
GGCGGGCGCA AGTTTGACCC TTATCCTTCG ACGCCTGCGC TGGGTAGCAA CGGCAAGCTG
TCCAGTTATT ATGAGCTGGC ACAGAATCCG TTCCAGACCT TTACCGGGGT GCTCAATAGC
CAATTCAAAC TGGCCGACAA CTTGGCCCTG TCGGTCATCC CGTATTACTT CTGGGGTAAC
GGCAGCGGTG TCAACAGCTC TTCTTACGCG CTCAACCGCG GCTCGAATCA GAACGGCGTA
TTCGACCTGA GCAACCTGCC GACTGCAGCG GCCTACAACG CGGACGGTTC ATCGACCACT
GGCGTTTATT ACCGGCCTTC GCGTACCCAG ACCTGGCGTC CGGGCATCAC CACCAAACTG
AACTGGGATG TCAACGACGA GCACAGCGTG CAAGTCGGCT ACTGGTATGA GCGTGCGCGC
CAGTTGCAGA CCCAGCCGTT CATCCGTCTG AAGAGCAACG GCAAGCCGCA AAGCATCTGG
CCAGATTCCG ATTACATGGT CGATGCCAAC GGCAATGAGA TCCAGGGTCG GGACCGCTAT
ACCGTAACGC CCGCACAGAA AGTCTGGGCT CAGGACACCT GGTATTTCGC CCCGGACTGG
ACGTTGATTG GCGGCCTGGC TTACATGAAT GTGAAGCGCG AAGGCACCAA CCACGGCAGC
CTGACCGAGC GCCCGGAAGA GCGTGACCAG ACGTATAACA AGTTGCTGCC CAATGTAGGT
CTGAAATACC AGCTGGATGA ACGTGATCAA CTGTTCTACA GCCTGTCGCG CAACATGCGC
GTGCCACAGA ACTACGCACT GTATGACCAG GGTGCCGGTT TTATCAACAG CAAACCGGAA
ACCAGCTGGA ACCACGAGCT GGGCTGGCGC TTTACCGACC AGGACACGAC GCTGGCGGCC
ACCCTGTTCT ATATGCAGTT CAAGGATCGC CAGGTCTCAT CCCGCGATAT CAACGGTGAC
TTTGCCGACA TCAACGCCGG TGCAGTGGAC AACAGCGGCC TGGAACTGGA GTGGAGCGGC
CTGTTGCCCC ACCATTTCAA CTACTACACC TCGTTCACCT ACACCCGCGC CAAACAGAAA
GATGACCTGA CCGTCTTCAA CAACGGCGCT GCCATCGAAT TGCCGACCAG CGGCAAGCAG
TTCGCCAACG TACCCAAGAA CATGCTGGCG GCCAATATCG GTTACGACGA CGGCAGTTAT
TACGGCACGT TTGGCGGCAA GGTCACCAGC AAGCTCTACG GCGACCTGAC CAACGACGAA
AGCATTCCGG GGCGCACCAT TTTCAATCTG GGCGCGGGTA TCTATTTGCC TGTGGACAAG
AAAATCGTCA AGGACGCCAC TTTGCGCCTG AACGTCGACA ACCTGTTCGA CAAGGACTAC
CTGGACGGCG TTTACACCAC CAAGACCAAC GCCGCCAGTT ACAGCGGTTT CCGCGATGGC
GACCCGGCCT ACATCGTCGG CGTCGAGCGT ACCGTCACGG TTTCCCTGGA AGCCAATTTC
TAA
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| Protein sequence | MKLSRIHLAL VAAGMSHGMV MADQSVSDVG TIGVQGKATA GGGYMVQEES IKARSTVTKE
ALDKQAATGN AIDKLKYTPG LNISSEDATG LSGFRFTMRG LNSDQVGMSV DGMPINDSGN
YALYSNLLGD PENIDQIFVT QGSAESDGPH IGSSGGNIGI VTIRPTKETG AFVKQVAGSN
GTYKTFARLN TGEINGLSNW LSMSHTEGQK WRGDGAVRAD KVEWNSFFDM GSGNTANLIL
KYHEQDNNSY SQLTKSQFQQ GGRKFDPYPS TPALGSNGKL SSYYELAQNP FQTFTGVLNS
QFKLADNLAL SVIPYYFWGN GSGVNSSSYA LNRGSNQNGV FDLSNLPTAA AYNADGSSTT
GVYYRPSRTQ TWRPGITTKL NWDVNDEHSV QVGYWYERAR QLQTQPFIRL KSNGKPQSIW
PDSDYMVDAN GNEIQGRDRY TVTPAQKVWA QDTWYFAPDW TLIGGLAYMN VKREGTNHGS
LTERPEERDQ TYNKLLPNVG LKYQLDERDQ LFYSLSRNMR VPQNYALYDQ GAGFINSKPE
TSWNHELGWR FTDQDTTLAA TLFYMQFKDR QVSSRDINGD FADINAGAVD NSGLELEWSG
LLPHHFNYYT SFTYTRAKQK DDLTVFNNGA AIELPTSGKQ FANVPKNMLA ANIGYDDGSY
YGTFGGKVTS KLYGDLTNDE SIPGRTIFNL GAGIYLPVDK KIVKDATLRL NVDNLFDKDY
LDGVYTTKTN AASYSGFRDG DPAYIVGVER TVTVSLEANF
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