| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1008 |
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| Symbol | |
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| ID | 1182642 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 1100918 |
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| End bp | 1102318 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637392389 |
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| Product | methyl-accepting chemotaxis protein |
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| Protein accession | NP_790846 |
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| Protein GI | 28868227 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.703746 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATTTT TCATGGTCAG ACGAAATGCC TTAATCCGGT CTACGCTTGT GCCGATATCA
TCGTACAACC TCACAAACGG TGCAGCCATG TTCAATACTC GCTTGAAAAA GGAATTACAG
GCACAGCAGG CCGAGTTATC CATGTACCGG CAGATGCAGA AAGGAATGGA CGCGCGAATG
GTGTCGTTGA GTCTGGACGC CAGCAATCGT ATTGCCCACG CCAATGACAA CTTCCTCAGA
GCGCTTGGCT ACACAGCCGA GCAGTTGCTG GGGAGGGAGC TTGATCAGAT GGTGCCGACC
TACGTCAAAC AGCTCGATTG CTACCGCAAC CTCAAACTGG CGGTGCAGAA GGGCGAGTCG
GTGATCGACA ACTACCGTTT TCTGCATGCC GACGGCAGCC TGGTGTGGGT TCGCGCCATG
TGGCAGCCGG TTCTGGATGA ACAGGGCAAG CTGGTGACGC TGCAGTGCTA CGGGTCGGAC
ATCACCCAGA CCGTCGAGAC CGCTGCCGAG AACTCTGCCT TCATCCAGGC CTTGCTGCGC
TCTACCGCCG TGATCGAGTT CGACCTCAGC GGCCACGTAC TGACGGCCAA TGACCAGTTT
CTGCGGGGCA TGGGTTACAA CCTGGCGCAG ATCAAGGGCA AGCACCACAG CCTGTTCTGT
GATCCGGCAG AAACCTCACT GGCACCGTAC CGCGAGTTCT GGGCGATGCT CAACCGGGGC
GAGTTCGTTG CCGGGCGCTT CAAGCGAATC GACAGCAGCG GGCGCGAAGT CTGGCTGGAG
GCCACCTATA ACCCGGTCCA CGACGCTCAG GGCAAGCTCT ACAAGATCGT CAAGTTCGCC
ACGCTGGTAA CCGATCAGGT GGCTCGCGAA GACGAAGTCA GTCAGGCGGC CAGCGTGGCA
TTCGAAATCT CCCAGCAGAC CGACGTCAGT GCCCAGCGTG GCGCGGACGT GGTGCAAAAC
ACCGTGCAGA CCATGCGCAA GATCTCCGAA GAGATGCAGT CGGCGTCCTC AGGCATTGAA
GCGCTGGGCA AGCAATCGTT GTTGATCAGC TCCATCGTGC AGACCATCGG TGGCATTGCC
CAGCAGACCA ACCTGCTGGC CCTCAACGCC GCCATCGAAG CCGCTCGTGC CGGTGAGCAG
GGCAGAGGCT TTGCTGTGGT GGCTGACGAA GTTCGGCAAC TGGCCGGCCG CACCAGCGCG
GCAACCGAAG AAATCGTCAA CGTTGTGCAG CAGAACAGGG CACTGGCCGA TGAAGCCGTA
CGCGGCATGG CCAACAGCCG CACCCAGGCG GAACAGGGTC TGGCACTGGC CAACGAAGCC
GGCGCGGTGA TCGTCGAGAT TCAGGAAGGC GCCAAACAGG TGGTCGGTGC GGTCGGGCGG
TTTGCCAATC AACTGAAGTA G
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| Protein sequence | MEFFMVRRNA LIRSTLVPIS SYNLTNGAAM FNTRLKKELQ AQQAELSMYR QMQKGMDARM
VSLSLDASNR IAHANDNFLR ALGYTAEQLL GRELDQMVPT YVKQLDCYRN LKLAVQKGES
VIDNYRFLHA DGSLVWVRAM WQPVLDEQGK LVTLQCYGSD ITQTVETAAE NSAFIQALLR
STAVIEFDLS GHVLTANDQF LRGMGYNLAQ IKGKHHSLFC DPAETSLAPY REFWAMLNRG
EFVAGRFKRI DSSGREVWLE ATYNPVHDAQ GKLYKIVKFA TLVTDQVARE DEVSQAASVA
FEISQQTDVS AQRGADVVQN TVQTMRKISE EMQSASSGIE ALGKQSLLIS SIVQTIGGIA
QQTNLLALNA AIEAARAGEQ GRGFAVVADE VRQLAGRTSA ATEEIVNVVQ QNRALADEAV
RGMANSRTQA EQGLALANEA GAVIVEIQEG AKQVVGAVGR FANQLK
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