| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1007 |
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| Symbol | |
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| ID | 1182641 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 1099814 |
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| End bp | 1100773 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637392388 |
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| Product | GDP-6-deoxy-D-lyxo-4-hexulose reductase |
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| Protein accession | NP_790845 |
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| Protein GI | 28868226 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.197321 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGACGCA TTCTGATCAC TGGTGCAAAC GGTTTTGTGG GTCAGATCCT GTGCAGCATG
CTGCGCCAGG CGGGTCATCA TGTCATCGCG CTGGTCGGTG CCGAGTCAGC TCTGTCATCG
CATGCTGACG AATCAGTGCG TTGTGACATC CGCGATGCCA GTGGCCTGGA GCAAGCGCTG
TGTCGGGCGG CTCCCACTCA TGTCGTGCAT CTGGCCGCGA TAACTCATGT GCCCACCAGC
TTCAACAACC CTGTCCTGAC CTGGCAAACC AACGTCATGG GCAGCGTAAA CCTGCTTCAA
GCACTGCAGC GAAGCGCCCC GGAGGCATTT GTGCTGTTTG TGAGCTCGTC GGAGGTGTAC
GGCGAGACCT TCAAGCAAGG TACTGCGCTG GGCGAAGACA GTGCCTGCAA ACCCATGAAT
CCCTATGCAG CCAGCAAGCT TGCCGCCGAG GCAGCGTTCA ATGAGTATTT CCGCCAGGGC
CGGAAAGGTA TCGTCGTTCG CCCTTTCAAT CATATCGGCG CCAGGCAATC ACCTGACTTC
GCGACGGCTT CATTTGCCCG GCAGATCGCC TTGATTGAAG CCGGGAAACA GGCCCCTCAG
TTGAAGGTTG GCAATCTACA GGCGGCGCGG GACTTTCTCG ACGTGCACGA TGTGTGCGAT
GCCTACGTCG CGCTGTTGCA GCTCGCCGAC GAGCAGGAGC GTTACCCAGG GTGCCTGAAC
ATCTGCCGCG GTGAGCCGAC AAGCCTGCAG ACGCTACTCA CGCAGTTGAT GGCACTGAGT
TCAAGCGTCA TCGAGGTGAC AATCGATCCG GACCGGATGC GTCCTTCAGA CATACCCAGC
GCTTTCGGCA ATAACTCCGC CATGCGCTGT GCCACCGGCT GGAAGCCCAA GACGAAGCTG
GACGATACAC TCGAAGCGTT GTTGAACTAC TGGCGTCACG AGGTGATTTC GGCGGTTTGA
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| Protein sequence | MRRILITGAN GFVGQILCSM LRQAGHHVIA LVGAESALSS HADESVRCDI RDASGLEQAL
CRAAPTHVVH LAAITHVPTS FNNPVLTWQT NVMGSVNLLQ ALQRSAPEAF VLFVSSSEVY
GETFKQGTAL GEDSACKPMN PYAASKLAAE AAFNEYFRQG RKGIVVRPFN HIGARQSPDF
ATASFARQIA LIEAGKQAPQ LKVGNLQAAR DFLDVHDVCD AYVALLQLAD EQERYPGCLN
ICRGEPTSLQ TLLTQLMALS SSVIEVTIDP DRMRPSDIPS AFGNNSAMRC ATGWKPKTKL
DDTLEALLNY WRHEVISAV
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