| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0997 |
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| Symbol | |
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| ID | 1182631 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 1087661 |
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| End bp | 1089664 |
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| Gene Length | 2004 bp |
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| Protein Length | 667 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637392379 |
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| Product | acyltransferase family protein |
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| Protein accession | NP_790836 |
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| Protein GI | 28868217 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1835] Predicted acyltransferases |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.378364 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCATTC CTCATAACCC TGCGCTCGGC TATCGCCCCG AGATCGACGG CCTGCGCGCG
TTGGCGGTGA TTCCCGTCAT TCTGTTTCAC GCCGGCCTGC CGCTGTTCAG CGGTGGATTC
GTCGGGGTCG ATATCTTTTT TGTGATTTCG GGCTATCTGA TCACCTCAAT CATTCTCGCG
GAAAAGATCA ACGGGAAGTT CTCGCTGATC AATTTCTATG AGCGACGTGC AAGGCGCATC
CTGCCAGCGC TGTTCGTGGT CATGCTGGTG TGCGTGCCGG TCGCCTGGTT GACGCTTGAC
CCACCGGACC TCAAGTACTT CGCCAAGAGC CTGGTGGCCG TGCCGATGTT TTCGTCAAAC
GTGCTGTTCT GGCTCGAAAG CGGCTATTTC GATGCGACGG CTGAACTCAA ACCACTGCTG
CACACCTGGA CGCTTGCGGT GGAGGAACAG TACTACCTGT TCTTTCCGCT GCTGCTGATG
CTCGGCTGGC GCATGGGCCG CACTAGACTG GTGATATTGC TGACCCTCAT CGCGCTGGGC
AGCCTGACGC TTTCGCAACT GGGTGCACGT AACGACGCCA GTAGCAGTTT TTACCTGCTG
CACGCACGCG CATGGGAATT ACTGACCGGC TCGTTTATCG CGCTCTACTG TGTCTGGCGA
ACGCGCCACG CGCCCAGCGT CAGCCTTCTC GATCAGGCGG CTGCGGCGCT GGGCGTGTTA
TTGATTGGCT ACGCCGTCGT GCAGTTCGAC GGCAGCACGC CGTTCCCTGG CCTAAATGCG
CTGGTGCCGG TGCTCGGTGC AGCGCTGATC ATCGTCTTTG CGCAAGGCAA GACTTGGGTT
GGTCGAGCGC TGAGTTCACC GGCGCTGGTG CTCATCGGCA TGATCAGCTA CAGCGCGTAC
CTGTGGCACC AGCCGCTTTT CGCCTTTGCT CGTCAGCGCA GCCTGAATGA GCCCGGCCTG
CCGTTGATGC TGAGCCTGAC CCTACTGTCG CTGATAGTGG CCTGGCTGAG TTGGCGCTAT
GTCGAGCAGC CTTTTCGCAA ACAGGGCGCA TTCAATCGCC AACAGGTGTT CACCTCGGCA
GGCGTCGCGT CGGCGCTGTT TATCGCGCTG GGGCTGACCG GTTACCTCAA CAACGGCTTC
AGCCAACGCT TCAACGTCGA TCCGGCCATT TATGAGGAAT TTGCCGACCC GCAGATTCGT
GACAAATGCA CTCAGACCAC CGTCGACTTT TGCCTGTTCG GCGCAGCCAA CCCAGACGCC
ACACCGGCTC TGGCGGTATT TGGCGACAGC CATTCGGAAG CCCTGTTATC AACCTTCGAT
AGCGTTGCCC GCCAGCAGGG CAAAACCATT GTTCATATCG GCCTGGGTGG CTGTCTGCCG
TTGTTGGGCG TGGACGTCGC CAGCGGCAAT TACGGCCCCG GCGTCTGCGA GGCGCTGGCC
AGCCGCGAGT TTGAGTACGT GAAAAAGCAC CGCATTGCAA AAGTGGTGCT GGTCGCGCGC
TGGACGCTTT ATACCGACGG CGATTACGGT AAAAAACCGA TGAGCAAGTA TTTCCTGATT
TCCGCCGACA GTCAGGAAAG AAGCCGTGCA GCCTCACGCG CCGTGTTCAA GCAGGCGCTC
GAAGCCACCG TTCGGGCGTA CCGCGACATC GGCAGCGAAG TGGTCATCAT TGCGCAGGTG
CCGCAGCAGT TGATCAACCC GGAAAACCTT TATTACCGGC TGGCTCGCGA CACATCGGAC
AGCCAGACGC AGAAGTTGCA GCGGATCAGC GAATTGTCAG TGCCGGTCGC AACGCATGAA
CATTTGCAGC GCTTCACGCG CGAAGTGTTC GGGCAGGCCA GCGAGTCGAA GCAGATCGGG
CTGATCACGC CGGATGCAGC GTTCTGCAAG GACAGCCAGT GCCTGATAGG CGACATGAAC
TCGTACTACA AGGACTTCAA CCACCTCAAC GCCAAAGGCG CCGGGCTGCT TGCCGGTCAG
ATCAGCCAAA TTGTTGCGCA GTGA
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| Protein sequence | MGIPHNPALG YRPEIDGLRA LAVIPVILFH AGLPLFSGGF VGVDIFFVIS GYLITSIILA
EKINGKFSLI NFYERRARRI LPALFVVMLV CVPVAWLTLD PPDLKYFAKS LVAVPMFSSN
VLFWLESGYF DATAELKPLL HTWTLAVEEQ YYLFFPLLLM LGWRMGRTRL VILLTLIALG
SLTLSQLGAR NDASSSFYLL HARAWELLTG SFIALYCVWR TRHAPSVSLL DQAAAALGVL
LIGYAVVQFD GSTPFPGLNA LVPVLGAALI IVFAQGKTWV GRALSSPALV LIGMISYSAY
LWHQPLFAFA RQRSLNEPGL PLMLSLTLLS LIVAWLSWRY VEQPFRKQGA FNRQQVFTSA
GVASALFIAL GLTGYLNNGF SQRFNVDPAI YEEFADPQIR DKCTQTTVDF CLFGAANPDA
TPALAVFGDS HSEALLSTFD SVARQQGKTI VHIGLGGCLP LLGVDVASGN YGPGVCEALA
SREFEYVKKH RIAKVVLVAR WTLYTDGDYG KKPMSKYFLI SADSQERSRA ASRAVFKQAL
EATVRAYRDI GSEVVIIAQV PQQLINPENL YYRLARDTSD SQTQKLQRIS ELSVPVATHE
HLQRFTREVF GQASESKQIG LITPDAAFCK DSQCLIGDMN SYYKDFNHLN AKGAGLLAGQ
ISQIVAQ
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