Gene PSPTO_0992 details

Gene Information

• Locus tag: PSPTO_0992
• Symbol: rimI
• ID: 1182626
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: +
• Start bp: 1083373
• End bp: 1083828
• Gene Length: 456 bp
• Protein Length: 151 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 637392374
• Product: ribosomal-protein-alanine acetyltransferase
• Protein accession: NP_790831
• Protein GI: 28868212
• COG category: [R] General function prediction only
• COG ID: [COG0456] Acetyltransferases
• TIGRFAM ID: [TIGR01575] ribosomal-protein-alanine acetyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.729447
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTGATG CCGTAACCTT CCGCCGCATG ACCGAAGCCG ATATGGACGC GGTGCTTAAA 
ATCGAATACG CAGCGTTCAC TCATCCGTGG ACGCGCGGGA TCTTTCTCGA CGGGCTCAAA 
TCCTACGAAA TCTGGCTGAT GTTCGAGGGC GCGCAGCAGG TGGGGCATGG CGTTATTCAG 
GTCATCATTG ATGAAGCGCA TCTGCTCAAT ATCACGGTCA AACCTGAAAA CCAGGGGCGG 
GGTCTTGGCT TGCTGCTACT CGACCACCTG ATGAAGCGCG CTTATCAGCT CAACGCCCGT 
GAATGCTTTC TGGAACTGCG CGACAGTAAC CGGCCAGCCT ATCGTCTGTA TGAAAACTAC 
GGTTTCAACG AGATAGGCCG GCGTCGTGAT TACTATCCGG CACCCGACGG CGGCCGTGAA 
GACGCAGTGG TCATGGCCTG CACGCTGTTC GACTGA 

 

Protein sequence

MSDAVTFRRM TEADMDAVLK IEYAAFTHPW TRGIFLDGLK SYEIWLMFEG AQQVGHGVIQ 
VIIDEAHLLN ITVKPENQGR GLGLLLLDHL MKRAYQLNAR ECFLELRDSN RPAYRLYENY 
GFNEIGRRRD YYPAPDGGRE DAVVMACTLF D