Gene PSPTO_0986 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0986 
Symbol 
ID1182615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand+ 
Start bp1070947 
End bp1071579 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content56% 
IMG OID637392363 
Producthypothetical protein 
Protein accessionNP_790825 
Protein GI28868206 
COG category[S] Function unknown 
COG ID[COG2717] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.0199995 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCTATC CGTTTTGGCG TCTGGCTGTA TTTCTCGCTG CCTGTGTTGC GCCGGTCTGG 
TGGCTCTATC AGGCATGGAT CTTTGCCCTG GGGCCTGATC CGGGCAAGGT CCTGGTAGAG 
AACTTCGGGC TCGCGACCTT GGTGATGCTG CTGATTACCC TGGCCATGAC GCCTTTGCAG 
CGTCTGACCG GCTGGCCGGG ATGGATCGTT GTGCGTCGTC AGCTGGGGTT GTGGTGTTTT 
GCTTATGTAG TGCTGCACAT GACGATGTAT GCGCTGTTCA TCCTTGGGCT GGATTGGGGG 
CAGTTGGGTG TGGAGCTGGT CAAGCGTCCT TATATTATCG TGGGTGCGCT GGCGTTCCTC 
GGCCTGCTGG CATTGGCGGT CACTTCCAAT CGTTATAGCC AGCGCCGCCT GGGCAGTCGT 
TGGAAAAAGC TGCACCGGCT TGTTTATGTC ATTCTGGGGC TGGGTTTGCT GCATATGTTC 
TGGATTGTCA GGGCCGACCT TAAAGAGTGG GCGCTGTATG CAGGTATAGG CGCGATCTTG 
TTGCTACTGA GAGTCCCAAT GATTGCTCGG CGAATCCCGC GTCTTGGAGG TGCTGCGAAG 
GCAGGGTCGA TAAAAGTTCA AAATAACGGT TGA
 
Protein sequence
MRYPFWRLAV FLAACVAPVW WLYQAWIFAL GPDPGKVLVE NFGLATLVML LITLAMTPLQ 
RLTGWPGWIV VRRQLGLWCF AYVVLHMTMY ALFILGLDWG QLGVELVKRP YIIVGALAFL 
GLLALAVTSN RYSQRRLGSR WKKLHRLVYV ILGLGLLHMF WIVRADLKEW ALYAGIGAIL 
LLLRVPMIAR RIPRLGGAAK AGSIKVQNNG