| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0985 |
|---|
| Symbol | |
|---|
| ID | 1182614 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | + |
|---|
| Start bp | 1069934 |
|---|
| End bp | 1070947 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637392362 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_790824 |
|---|
| Protein GI | 28868205 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2041] Sulfite oxidase and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00832393 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTAATCA AGCTTCCTTC TGCGTCGGGC TCCAAAGAGT CGGACGTCAC GCCTGAATCC
ATCTACCTCT CGCGACGTAC ATTGCTCGCC AGCTCGCTTG CTGGTCTGGC CGTCACGGCG
CTGCCACGTT GGGCAAGCGC TGCAGACGCG TCCCGCTACG CCGATGTCGA GGCCGGGAAA
GCACCGGGCT GGTTTGCCGA CAAACTCCCC TCTACTCAAT GGCAGGCGGT CACCGTCAAG
GACGAGGCGA TCACGCCGTT CAAGGATGCG ACCCACTACA ACAACTTCTA TGAATTCGGC
ACCGACAAGG GCGATCCGGC GAAGAATGCT GGTTCCTTGA AGACCGAGCC GTGGACGGTG
GTAATTGACG GCGAAGTCGG CAAGCCGGGC CGCTATGCGC TTGAAGACTT CATGAAGCCT
TATCAGTTGG AGGAACGGAT CTACCGACTG CGCTGCGTCG AAGCCTGGTC GATGGTGATT
CCCTGGATAG GCTTTCCGAT CTCGGCACTG CTCAAGCAGG TAGAACCGAC CTCCAAAGCC
AAATACATCC GCTTTGAAAC GCTCGAAGAC GCCAAGTCCA TGCCCGGCCA GCGCTCGGAT
TTCGCCCTGA TCGATTGGCC CTACGTAGAA GGGCTACGTC TGGACGAGGC GATGAACCCG
CTGGCGATTC TTGCGGTGGG CATGTACGGG CGTGAATTGC CTAATCAGAA CGGCGCGCCG
CTGCGTCTTG TAGTGCCGTG GAAGTATGGC TTCAAGAGTG TGAAGTCCAT CGTGCGTATC
AGTCTGGTCA GCGAGCAGCC TAAGACGACA TGGCAGAGCA TTGCGGCCAA CGAATATGGC
TTCTATGCCA ACGTCAATCC AATGGTCGAC CACCCGCGCT GGACCCAGGC CCGTGAGCGC
CGCTTGCCAA GTGGCCTGTT CAGCCCGAAT CTGCGCGAAA CGAAGATGTT CAACGGCTAT
GAGGAGGAGG TCGGCTCCTT GTATGCCGGG ATGAATTTGC GGAAGGACTA TTGA
|
|---|
| Protein sequence | MLIKLPSASG SKESDVTPES IYLSRRTLLA SSLAGLAVTA LPRWASAADA SRYADVEAGK
APGWFADKLP STQWQAVTVK DEAITPFKDA THYNNFYEFG TDKGDPAKNA GSLKTEPWTV
VIDGEVGKPG RYALEDFMKP YQLEERIYRL RCVEAWSMVI PWIGFPISAL LKQVEPTSKA
KYIRFETLED AKSMPGQRSD FALIDWPYVE GLRLDEAMNP LAILAVGMYG RELPNQNGAP
LRLVVPWKYG FKSVKSIVRI SLVSEQPKTT WQSIAANEYG FYANVNPMVD HPRWTQARER
RLPSGLFSPN LRETKMFNGY EEEVGSLYAG MNLRKDY
|
|---|
| |