Gene PSPTO_0981 details

Gene Information

• Locus tag: PSPTO_0981
• Symbol: ilvB
• ID: 1182610
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: +
• Start bp: 1065591
• End bp: 1067315
• Gene Length: 1725 bp
• Protein Length: 574 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 637392358
• Product: acetolactate synthase, large subunit, biosynthetic type
• Protein accession: NP_790820
• Protein GI: 28868201
• COG category: [E] Amino acid transport and metabolism; [H] Coenzyme transport and metabolism
• COG ID: [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
• TIGRFAM ID: [TIGR00118] acetolactate synthase, large subunit, biosynthetic type

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGAGCTTT TATCTGGCGC TGAAATGATC GTCCGCTTTT TGCGTGACGA AGGCGTTGAG 
CACATCTATG GGTACCCGGG TGGTGCCCTC CTGCATGTCT ACGATGCCCT GTTCAAAGAA 
CCGGCCGTCA GCCATATCCT TGTTCGTCAC GAGCAGGCGG CTACGCACAT GGCCGACGGC 
TATGCGCGCG CCACCGGCAA GGCGGGTGTG GTGCTGGTGA CGTCCGGCCC TGGTGCAACC 
AATGCCATTA CCGGTATCGC CACGGCGTAT ATGGACTCCA TTCCGATGGT GGTTCTGTCC 
GGTCAGGTAG CGAGCACCCT GGTGGGCACC GACGCATTCC AGGAGACCGA CATGATCGGT 
ATCTCCCGGC CGATCGTGAA GCACAGCTTC ATGATCAAGC ACCCGTCGGA AATTCCGGAA 
ATTCTGAAGA AGGCTTTCTA CCTGGCGCAG TCCGGTCGTC CCGGCCCTGT GGTCGTGGAT 
ATTCCGAAAG ACATGACCAA CCCGGCCGAG AAATTCGAAT ACGTCTTTCC GAAAAAAGCC 
AAGCTGCGCT CCTACAGCCC TGCGGTCCGC GGTCATTCCG GCCAGATCCG CAAGGCTGTG 
GAAATGCTCC TGGCCGCCAA GCGTCCTATC ATCTATGCCG GTGGCGGCGT GATCATGGGC 
AACGCTTCGG CGCAACTGAC CGAGCTGGCT CAACTGCTCA ATGCCCCAGT GACCAATACG 
CTGATGGGCC TGGGTTGCTA TCCCGGCACC GATCGCCAGT TCGTCGGTAT GCTCGGGATG 
CACGGCAGCT ATACCGCCAA CCTTGCGATG CACCACACCG ACGTGATTCT GGCTGTCGGC 
GCGCGTTTCG ATGACCGGGT GATCAATGGC GCGAGCAAGT TCTGCCCGAA CGCCAAGATC 
ATCCACATCG ATATTGACCC TGCGTCGATC TCCAAGACCA TCAAGGCTGA CGTGCCTATC 
GTCGGCCCTG TCGAAAGCGT GCTGACCGAA ATGGTCGCCA CCCTGAAAGA AATCGGCGAA 
ACGCCTGACA AGGCGTCGGT CGCTGCATGG TGGAAGCAGA TTGACGAGTG GCGCGGTAGC 
GGCGATCTGT TCCCGTACAA CCGTGGCGAT GGCACTGTCA TCAAGCCGCA GGCGGTGATC 
GAAACACTGT GCGAAGTCAC CAAGGGCGAT GCCTATGTGA CCTCCGACGT GGGTCAGCAT 
CAGATGTTTG CTGCGCAGTA CTACCGTTTC AACAAGCCGA ACCGCTGGAT CAACTCCGGC 
GGTCTGGGCA CCATGGGCTT TGGCTTCCCG GCGGCGATGG GCGTCAAGCT GAGCTTTCCG 
GACGAGCACG TTGCCTGTGT GACCGGTGAA GGCAGCATCC AGATGAACAT TCAGGAGCTT 
TCGACCTGTC TGCAATATGG CCTGCCGGTG AAGATCATTC TGCTCAATAA CGGTGTGCTG 
GGCATGGTTC GCCAGTGGCA GGACATGAGC TACGGCGCGC GTCACTCGCA TTCCTACATG 
GAATCGCTGC CTGACTTCGT CAAGCTGGTC GAGGCTTATG GCCACGTCGG CATGCGCATC 
ACCGATTTGA AAGATCTCAA GCCGAAGATG GAAGAAGCGT TTGCCATGAC TGACCGGCTG 
GTGTTCCTTG ATATTCAGGT CGATGTGAGC GAGCACGTCT ATCCGATGCA GATCAAGGAC 
GGCTCCATGC GCGATATGTG GTTGAGCAAG ACGGAGCGGA CATAA 

 

Protein sequence

MELLSGAEMI VRFLRDEGVE HIYGYPGGAL LHVYDALFKE PAVSHILVRH EQAATHMADG 
YARATGKAGV VLVTSGPGAT NAITGIATAY MDSIPMVVLS GQVASTLVGT DAFQETDMIG 
ISRPIVKHSF MIKHPSEIPE ILKKAFYLAQ SGRPGPVVVD IPKDMTNPAE KFEYVFPKKA 
KLRSYSPAVR GHSGQIRKAV EMLLAAKRPI IYAGGGVIMG NASAQLTELA QLLNAPVTNT 
LMGLGCYPGT DRQFVGMLGM HGSYTANLAM HHTDVILAVG ARFDDRVING ASKFCPNAKI 
IHIDIDPASI SKTIKADVPI VGPVESVLTE MVATLKEIGE TPDKASVAAW WKQIDEWRGS 
GDLFPYNRGD GTVIKPQAVI ETLCEVTKGD AYVTSDVGQH QMFAAQYYRF NKPNRWINSG 
GLGTMGFGFP AAMGVKLSFP DEHVACVTGE GSIQMNIQEL STCLQYGLPV KIILLNNGVL 
GMVRQWQDMS YGARHSHSYM ESLPDFVKLV EAYGHVGMRI TDLKDLKPKM EEAFAMTDRL 
VFLDIQVDVS EHVYPMQIKD GSMRDMWLSK TERT