Gene PSPTO_0979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0979 
Symbol 
ID1182608 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp1064438 
End bp1064767 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content58% 
IMG OID637392356 
Producthypothetical protein 
Protein accessionNP_790818 
Protein GI28868199 
COG category[S] Function unknown 
COG ID[COG3098] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.552036 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGTAC GCTTACCTGA AGTTGCCGAG CAATTGCTGT TGATCGAGCG CGAATTGCGC 
ACCCTGGGCT GGTGGGATGC CACACCGCCC AGCGAGCAGG CACTTGCCAG TCAGGAGCCG
TTCAGCGTTG ACACGCTTGA GTTTGCGCAG TGGCTGCAAT GGATCTTCCT GCCGCGCATG
AAGATCATTC TCGAAAACGA CCTGCCGCTG CCCAATGCAT CCGGCATTCT GGAAATGGCC
GAGATGGTCT ATGCCGGACG CCAGAGCGAG GCCCGGTTGC TGCAACAGCA TCTGGCCCGA
TTCGATCAGT TGATTATTGC GGCACGCTGA
 
Protein sequence
MDVRLPEVAE QLLLIERELR TLGWWDATPP SEQALASQEP FSVDTLEFAQ WLQWIFLPRM 
KIILENDLPL PNASGILEMA EMVYAGRQSE ARLLQQHLAR FDQLIIAAR