| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0977 |
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| Symbol | |
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| ID | 1182606 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 1061359 |
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| End bp | 1063680 |
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| Gene Length | 2322 bp |
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| Protein Length | 773 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637392354 |
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| Product | penicillin-binding protein |
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| Protein accession | NP_790816 |
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| Protein GI | 28868197 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | [TIGR02071] penicillin-binding protein 1B |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0441683 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTCGAT CCCGCACCTC TCGTTCCCCT AAAAAACAAC CTCCCCGCAG CCTGAACAAG
TGGCTGGGCT GGGCGTTGAA GCTCGGTATT GTCGGCCTGG TTCTGCTGGG CGGCCTGGCC
ATCTACCTTG ATGCGATTGT TCAGGAGAAA TTCTCCGGCA AGCGCTGGAC CATTCCGGCC
AAGGTTTATG CGCGGCCGCT GGAGCTGTTC GTCGGGCAGA AGCTGAGCCG CGATGACTTC
CTCATTGAGC TCGACGCGCT GGGTTATCGC CGCGAAAGCG TGGCCAATGG CCCAGGTGCT
GCGGCGGTTA ATGGCAATAC CGTCGATCTT AATACGCGTG GCTTCCAGTT CTACGAGGGC
ACGGACGCAG CACAGCAGGT GCGCGTACGT TTCGCTGGCG ATTCGGTTGC CGACCTATCT
TCCGGCAACG GTGCCAAGCT TGCCGTGGCG CGGCTCGAGC CGTTGCTGAT CGGTGGCTTG
TACCCGAAAA ATCTGGAAGA CCGAATCCTC ATCAAGCTTG ATCAGGCACC GCCGTATCTG
CTCGACGGGC TGGTGGCAGT AGAGGACCGG GATTTTTATC ACCACTTCGG TGTGTCACCC
AAGTCCATTG CCCGTGCGAT CTGGGTCAAT ACCTCGCAGG GCCAGATGCG CCAGGGCGGC
AGTACGCTGA CTCAACAGTT GGTGAAGAAC TTCTACCTGA CCAACGAGCG CAGCCTGAGC
CGCAAGCTGA CTGAGGCGAT GATGGCGGTC TTGCTGGAAA TTCATTACAG CAAGCAGGAA
ATCCTCGAGG CTTATCTCAA TGAAGTGTTC GTTGGCCAGG ATGGTCAGCG CGCAGTTCAT
GGCTTTGGTC TGGCCAGTCA GTATTTCTTC AGTCAACCGC TATCCGAGCT GAAAATTCAC
CAGGTAGCGA TGCTGGTCGG GCTGGTCAAA GGGCCGTCCT TCTACAATCC ACGTCGCAAC
CCTGAACGTG CGATGGAGCG CCGCAACCTT GTACTCGATC TGTTTGAGCA GCAAGGCGTT
GCCACGCCCG AAGTGGTGGC GGCGGCCAAG AAATTGCCAC TGGGTGTGAC CAAAACCGGC
ACGCTGGCTG ACAGCTCGTT CCCGGCCTTC CTCGATCTGG TCAAGCGCCA GCTACGCGAA
GACTACCGCG ACGAAGACTT GACCGAAGAA GGGCTGCGGA TCTTCACCAG CTTCGATCCG
ATTCTGCAGA TGAAATCCCA GGCTGCCATG GACGATACGT TCAAAAAGCT GGCCGGGCGC
AAGGGTGTCG ATGAGGTAGA AGCGGGGATG GTCGTCACCA ACCCGGAGAC CGGCGAAGTG
CAGGCGCTGA TCGGTGGTCG CGAGGCGGGT TTCTCCGGTT TCAACCGGGC GATCGATGCG
GTGCGGCCGA TTGGTTCGCT GGTCAAGCCG GCTATTTACC TGACGGCGCT GGAGCGTCCA
AGCCAATACA CGCTGACCAG CTGGATTGCC GACGAACTCT TTCAGGTCAA GGGCGCTGAT
GGCCAGATCT GGAAGCCGCA GAACTACGAT CACAAGTCCC ATGGCAATAT CTTTCTGTAT
CAGGGGCTGG CGCACTCTTA CAACCTGTCG ACTGCCAAGC TGGGTCTTGA GCTAGGCATT
CCGACGGTCT TCAAGACACT GGCCAAACTG GGCGTGACCC GTGAGTGGCC TGCCTACCCG
TCGATGCTGC TGGGCGCGGG CGGCTTGAGC CCGATGGAAG TCGCCACTAT GTATCAGACC
ATCGCCAGTG GCGGGTTCAA TACGCCGATG CGTGGCATCC GCAGTGTGCT GACTGCCGAA
GGTGAGCCGC TCAAGCGTTA TCCGTTCAAG ATCGAGCAGC GTTTCGATCC GGGTGCCATT
TATCTGGTGC AGAACGCGAT GCAGCGGGTC ATGCGTGAAG GCACGGGCAA ATCTGTTTAC
AGCGTATTGC CGAGCTCGCT GAACCTGGCG GGCAAGACCG GCACCAGTAA TGACTCGCGC
GACAGCTGGT TCGCAGGTTT CAGTCAGGAT CTGCTTGCCG TGGTGTGGAT GGGCCGTGAC
GATAACGGTA AGACTCCGTT TACCGGCGCT ACCGGTGCCT TGCAGGTCTG GACCAGCTTC
ATGCGCAAGG CCAACCCGCT GCCGCTCGAC ATGGCGATGC CCGACAACGT CGTTCAGGCG
TGGGTCGATG CACAGACCGG TCAGGGTTCG GACGCCAGCT GCCCGAATGC AGTGCAGATG
CCGTATATTC GCGGCAGTGA ACCCCAGCCC GGCGCAACAT GCGGCGGCGC TCCGGCACCT
GCCACTGAGG TGATGGACTG GGTCAAGGGT TGGTTGAACT AG
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| Protein sequence | MTRSRTSRSP KKQPPRSLNK WLGWALKLGI VGLVLLGGLA IYLDAIVQEK FSGKRWTIPA
KVYARPLELF VGQKLSRDDF LIELDALGYR RESVANGPGA AAVNGNTVDL NTRGFQFYEG
TDAAQQVRVR FAGDSVADLS SGNGAKLAVA RLEPLLIGGL YPKNLEDRIL IKLDQAPPYL
LDGLVAVEDR DFYHHFGVSP KSIARAIWVN TSQGQMRQGG STLTQQLVKN FYLTNERSLS
RKLTEAMMAV LLEIHYSKQE ILEAYLNEVF VGQDGQRAVH GFGLASQYFF SQPLSELKIH
QVAMLVGLVK GPSFYNPRRN PERAMERRNL VLDLFEQQGV ATPEVVAAAK KLPLGVTKTG
TLADSSFPAF LDLVKRQLRE DYRDEDLTEE GLRIFTSFDP ILQMKSQAAM DDTFKKLAGR
KGVDEVEAGM VVTNPETGEV QALIGGREAG FSGFNRAIDA VRPIGSLVKP AIYLTALERP
SQYTLTSWIA DELFQVKGAD GQIWKPQNYD HKSHGNIFLY QGLAHSYNLS TAKLGLELGI
PTVFKTLAKL GVTREWPAYP SMLLGAGGLS PMEVATMYQT IASGGFNTPM RGIRSVLTAE
GEPLKRYPFK IEQRFDPGAI YLVQNAMQRV MREGTGKSVY SVLPSSLNLA GKTGTSNDSR
DSWFAGFSQD LLAVVWMGRD DNGKTPFTGA TGALQVWTSF MRKANPLPLD MAMPDNVVQA
WVDAQTGQGS DASCPNAVQM PYIRGSEPQP GATCGGAPAP ATEVMDWVKG WLN
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