| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0971 |
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| Symbol | sfsA |
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| ID | 1182600 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 1056798 |
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| End bp | 1057511 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637392348 |
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| Product | sugar fermentation stimulation protein |
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| Protein accession | NP_790810 |
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| Protein GI | 28868191 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1489] DNA-binding protein, stimulates sugar fermentation |
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| TIGRFAM ID | [TIGR00230] sugar fermentation stimulation protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000643162 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTTTTT CCCCAGAGCT CGAACAGGGT CGCCTGCTGG TGCGCTACAA GCGCTTTCTG
GCTGATATCG AAACCGACAG CGGTGAGTTG CTGACCATTC ACTGCCCCAA CACCGGCTCG
ATGCTCAACT GCATGATGCC CGGTGGGCGG GTATGGTTCA GTCGCTCCAA TGACCCCAAG
CGCAAGCTGC CGGGCACTTG GGAAATCAGC GAGACGCCGC AAGGCCGCTT GGCCTGTATC
AATACCGGAC GGGCCAATAC GCTGGTCGAA GAAGCATTGC GCGCCGGGGT GATCCGCGAA
CTTGAGGGGT TTACAGCGCT CAAGCGTGAG GTGGCCTACG GGCAGGAAAA AAGCCGTGTG
GACTTTCGTC TGGAATACCC GGACGGCTAC CTGTACCTGG AGGTAAAAAG TGTGACCCTG
GGTTTCGCCG ACTCTGCGGT GGCAGCGTTT CCCGACGCGG TCACCCAGCG TGGGGCGCGG
CACCTTCGCG AACTGGCCAC GCTGGCCCGT GAAGGCGTGC GAGCGGTGTT GCTGTACTGC
GTCAATCTCA CGGGCATAGA GGCTGTGCGC CCGGCCAAAG AGATCGACCC GGCGTACGCC
GCTGCACTAC GCGAAGCGGT CGATGCCGGC GTGCAGATCC TCGCGTATGG GGTGCAGTTG
ACGCCAGAAG CGGTATATAT CGACCGGCAT CTCGAGGTGC ACTGGCCGGA TTGA
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| Protein sequence | MRFSPELEQG RLLVRYKRFL ADIETDSGEL LTIHCPNTGS MLNCMMPGGR VWFSRSNDPK
RKLPGTWEIS ETPQGRLACI NTGRANTLVE EALRAGVIRE LEGFTALKRE VAYGQEKSRV
DFRLEYPDGY LYLEVKSVTL GFADSAVAAF PDAVTQRGAR HLRELATLAR EGVRAVLLYC
VNLTGIEAVR PAKEIDPAYA AALREAVDAG VQILAYGVQL TPEAVYIDRH LEVHWPD
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