Gene PSPTO_0969 details

Gene Information

• Locus tag: PSPTO_0969
• Symbol: dksA
• ID: 1182598
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: -
• Start bp: 1054836
• End bp: 1055276
• Gene Length: 441 bp
• Protein Length: 146 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 637392346
• Product: dnaK suppressor protein
• Protein accession: NP_790808
• Protein GI: 28868189
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG1734] DnaK suppressor protein
• TIGRFAM ID: [TIGR02420] RNA polymerase-binding protein DksA

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.0480379
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCCACCC CAGAAAAGCA ACAGAACCAT CTAATCGGCG GCTTTGAACC CTATGTAGCG 
ACAAAGGGCG AAGAGTACAT GAGCGAGCCC ATGCGCGCGC ACTTCACCAA GATCCTGAAC 
AAGTGGAAGC AGGACTTGAT GCAAGAGGTC GACCGAACGG TGGATCACAT GAAGGACGAA 
GCTGCCAATT TCCCTGATCC GGCCGACCGT GCCAGCCAGG AAGAGGAATT CAGCCTTGAA 
CTCCGTGCCC GTGACCGCGA GCGCAAGCTG ATCAAGAAGA TCGACAAGAC GCTGCAATTG 
ATCAAGGACG AAGAATACGG CTGGTGCGAA TCCTGCGGCG TAGAGATCGG CATCCGCCGT 
CTCGAAGCAC GCCCGACTGC CGACCAGTGC GTCGATTGCA AGACCCTTGC TGAAATCAAG 
GAAAAACAGG TCGGTAAATG A 

 

Protein sequence

MPTPEKQQNH LIGGFEPYVA TKGEEYMSEP MRAHFTKILN KWKQDLMQEV DRTVDHMKDE 
AANFPDPADR ASQEEEFSLE LRARDRERKL IKKIDKTLQL IKDEEYGWCE SCGVEIGIRR 
LEARPTADQC VDCKTLAEIK EKQVGK