Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0953 |
Symbol | |
ID | 1182582 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 1031386 |
End bp | 1032381 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637392330 |
Product | fructose repressor FruR, putative |
Protein accession | NP_790792 |
Protein GI | 28868173 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | [TIGR02417] D-fructose-responsive transcription factor |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAACTGA GCGATATTGC ACGTCTGGCA GGTGTTTCTG TCACCACCGC CAGCTATGTC ATCAACGGCA AGGCCGAACA ACAACGCATC AGCCCCGCAA CGGTCGAGCG CGTCAAGGCG GTGGTCGAGC AATACGACTT CCGACCCAAC CCTCAAGCAG CGGGCCTGCG CAGTCGTCAC AGCAAAACGC TGGGCTTCAT CCTGCCGGAT CTGGAAAACC CCAGCTATGC GCGTATCGCC AAACTGCTCG AGCAGGGCGC GCGCAGTCTT GGCTATCAAT TGCTGATTGC CAGCTCCGAT GATGACCCGG TCAGTGAACT GCAACTGTTA CAGCTGTTTC GCGCACGCCG CTGTGATGCC CTGCTGGTCG CCAGCTGCCT GCCGCCCAGC GACGCGAGCT ATCGCGACTT GCAGCTCAAA GGCATGCCGA TCATCGCCAT CGACCGGGAA ATGGACCCGA ACTTCTTCTG CTCGGTGGTC AGCGACGACC ATGATGCCAG CCTGCAGTTG ACGCGCAGCC TGCTGCAAAC CCAGCCAAGG CACATTGCCC TGATCGGTGC GCGCCCCGAG CTGAGCATCA GCCGGGCCCG GGCAGCAGGC TTCGAACACG CATTGGATGG TTTTGCCGGC ACCACCATCG TCGAGCACGG CGAAGCGTTC AGCCGCCAGT GTGGGCAGCG CCTGATGTCC GAGATGCTGC AACGCCAGGG GCATTTTCCA GATGCATTGA TCACCACCTC CTATGTGCTG CTGCAAGGCG TGTTCGACGT ACTGCAAAGC CAGTCACTCA ACACGACCTC ACTGCACCTG GGCACGTTCG GTGATACGCA ATTGCTGGAT TTTCTGCCGT TGCCCGTCAA TGCAATGGCC CAGCAACATC AGTTGATCGC TGACAAAGCG CTGCAACTGG CCTTGGCCGC CATCGAGAAG GACGATTATC AACCTGGCGT GCATGCCATC GCGCGCGCCT TCAAGCAACG CATTCACGGG GTGTGA
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Protein sequence | MKLSDIARLA GVSVTTASYV INGKAEQQRI SPATVERVKA VVEQYDFRPN PQAAGLRSRH SKTLGFILPD LENPSYARIA KLLEQGARSL GYQLLIASSD DDPVSELQLL QLFRARRCDA LLVASCLPPS DASYRDLQLK GMPIIAIDRE MDPNFFCSVV SDDHDASLQL TRSLLQTQPR HIALIGARPE LSISRARAAG FEHALDGFAG TTIVEHGEAF SRQCGQRLMS EMLQRQGHFP DALITTSYVL LQGVFDVLQS QSLNTTSLHL GTFGDTQLLD FLPLPVNAMA QQHQLIADKA LQLALAAIEK DDYQPGVHAI ARAFKQRIHG V
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