| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0952 |
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| Symbol | |
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| ID | 1182581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 1030586 |
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| End bp | 1031284 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637392329 |
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| Product | hydrolase, TatD family |
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| Protein accession | NP_790791 |
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| Protein GI | 28868172 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0084] Mg-dependent DNase |
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| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGGTAC TCGGGGTGTA TCAGCGTAAC TGGCAGCGGT TATGGGACCT GACCGAAGCC
AACCCGCAGT TGCATGCTGC GTTCGGCCTG CACCCGGTTT ATATCGATGA GCACCAGGCT
GAGCACCTGA CCGAACTGGG TGACTGGCTG ACCCATCTGA AAAGCCATCC GCAGCTTTGC
GCAGTGGGCG AGATTGGCTT GGATTACTAC GTCGATCATC TGGACAAGGT GCGTCAGCAG
GAAGTCTTTG AAACGCAGTT GCAGTTGGCG TCCGACTTTA ACCTGCCTGT CTTGCTGCAC
GTGCGCCGCA GTCATGCCGA TGTGATTGCC ACCCTCAAGC GCTATCGGAT TAAGCGCAGC
GGCATCGTTC ATGCTTTCGC AGGCAGCCGT GAAGAGGCGC GCGAATACAT AAAGCTCGGT
TTCAAACTGG GCCTGGGCGG GGCGGCAACC TGGCCACAGG CGCTGCGCAT GCATCGCGTA
ATCGCCGACC TGCCGCTGGG CAGCGTGGTG CTGGAAACCG ATGCACCGGA CATGGCCCCC
GCCATGTATC CCAATCAGCG CAACAGCCCG GAGCACTTGC CGGACATCTG TCAGGCGCTC
GCAGCCCTGA TGAACATCAG CCCGCAGCGC CTGGGCGAAG CGAGTACAGA GAATGCCTGC
CAGCTGTTTG ACTGGCCTCA TACAGCCCAG AGTGTGTAA
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| Protein sequence | MVVLGVYQRN WQRLWDLTEA NPQLHAAFGL HPVYIDEHQA EHLTELGDWL THLKSHPQLC
AVGEIGLDYY VDHLDKVRQQ EVFETQLQLA SDFNLPVLLH VRRSHADVIA TLKRYRIKRS
GIVHAFAGSR EEAREYIKLG FKLGLGGAAT WPQALRMHRV IADLPLGSVV LETDAPDMAP
AMYPNQRNSP EHLPDICQAL AALMNISPQR LGEASTENAC QLFDWPHTAQ SV
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