| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0951 |
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| Symbol | |
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| ID | 1182580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 1029602 |
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| End bp | 1030438 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637392328 |
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| Product | ampE protein |
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| Protein accession | NP_790790 |
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| Protein GI | 28868171 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG3725] Membrane protein required for beta-lactamase induction |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTTTC TGGTGCTACT GCTGGCAGTG CTTATCGAAA AGTTTTCTGC CCTGCGTCAG
CGCGTACAAC GTGATGAACC GTGGCTGAAT GCGTTTGCCA GGCGTGAGGC CAGCCCGCGC
ACGGCGAAAC GCCCCTGGCT GACGCTGGCG TTGCTGATTC TGGTGCCGGT TTTGCTGCTG
CAACTGGCGC TGACCATTAT CGGGTCGGTG GCGTATGGCT GGCTGGTGCT GCCCATCCAC
CTGCTGGTGC TGATCTACAG CCTGGGGCGG GTCGACCTGA TTGCAGTGCT CGGCCCGTTT
CGCGATGCCT GCCGACGTGG CGACGCGCAG GCCGCGGTGC ACGTCGCCCA GCGCGACATG
CGCGTTGAGG CCGATAATGG CGAGCAATTG CTGCAAGGCG TGCAGGGTTA CATGCTCTGG
CAGGCGTTCC AGAGTTTTTT CGCAGTGATC TTCTGGTATT TCGTGCTCGG TCCGGTGGCG
GCGCTGGCTT ATCGGCTTTT GGCCCTTGCC GCTGAACATG GCAAGACACC CCCGCTGGTC
GAGCGGGCAG GGCAGTTGCG CCATGCCTTC GATTGGGTCC CGGTCAGGTT GCTGGCAGCA
AGCTTTGCGC TGGTCGGCAA TTTTGTCGCG GTCAGCCGGG TGATGCTGCA CGAATTGCTC
AACTGGAACA TCAGCGCCGC GCAATTGATC ACCCGCGTTG GCTGCGCCGC CAGCGAAGTC
CCGCCGCCGG TCATCGGGAC GCAAGGGGTG ACCAGCCTCG ACATGCTCTG GGAGCTGCTG
GTGCGTGCCG CGATTGTCTG GTACGCAGGG TTTGCGTTGT GGACGCTATT GCGCTGA
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| Protein sequence | MSFLVLLLAV LIEKFSALRQ RVQRDEPWLN AFARREASPR TAKRPWLTLA LLILVPVLLL
QLALTIIGSV AYGWLVLPIH LLVLIYSLGR VDLIAVLGPF RDACRRGDAQ AAVHVAQRDM
RVEADNGEQL LQGVQGYMLW QAFQSFFAVI FWYFVLGPVA ALAYRLLALA AEHGKTPPLV
ERAGQLRHAF DWVPVRLLAA SFALVGNFVA VSRVMLHELL NWNISAAQLI TRVGCAASEV
PPPVIGTQGV TSLDMLWELL VRAAIVWYAG FALWTLLR
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