Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0935 |
Symbol | |
ID | 1182564 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 1013292 |
End bp | 1014425 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637392312 |
Product | hypothetical protein |
Protein accession | NP_790774 |
Protein GI | 28868155 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.720236 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACAGCA GCGCAGCTTT TTCCAACCCT ACAAAGCTTC GTGCTGATCT GCTTCGTGGT CGCCTCGACG TCAGCGTCGA TTCGTCCACC ATTGCCCCGG ATTCACTGTT CGGCTTCGCC GAGCGGCGCA ATCCCAAACG CGCGTTTCTG TTCGTTTCGC GGGTGCTCGG GCGTCATATC CCGGCGCGCC CGAGCGTAAT GCTCAAGAGT TTTCAGGACC TGGCGCACAA GATTCCGGTA GACCTGCCAG GCCCGGTGCT GGTCATCGGT ATGGCCGAAA CAGCCGTGGG CCTGGGTGCC GGTGTGCACC GTGCCTACAG CGAAACGCAT TCCGATGCGC TGTACTTGGT CAGCACGCGC CATCCAACCG GCACCGAGCT GTTCGCCCGT TTTGAAGAAG AGCACAGCCA CGCCAGCGCG CACTTGATTC ACTTGCCTGC CGATCCTGCG CTGCGCGACA TGATGCTCGG TGCACGTTCG CTGGTGCTGG TCGATGACGA AGCGTCGACG GGCAAGACGT TCATCAATCT GCATCAGGCG CTGGTCGAGG CCGGGCTGAG CAAGATCGAG CGGGTGGTGA CCTGCGTGCT CACTGATTGG TCGGCAGGTG CGGTCAGCAC GTCGATGGGC GCGGTGGCTG AGCAGGTGTC GCTGTTGCAG GGCTCGTATT CCTTTGACGA GGACGTCAGC GCGCCGCTGC CGGACATGCC GGAAGTCGGC ACCGTTGCGA TGGGCGACTG GCCGTTGCTG ACCGCCAACG ACTGGGGGCG CATGGGCGTG CTGGCGGTTG CCGATACGCT GGCGCCTGGC CTTACGGTAA ACAAGGGCGA GCGCGTTCTG GTGGTCGGCA CCAGCGAGTT TGTCTGGCGT CCTTTTCTGT TGGCCGAGCG CCTGGAAAAA GCCGGGGCTG ATGTGCATTT CAGCTCCACC AGCCGTTCGC CGATCGCGCT GGGGCATGCC ATCGATCACG CGCTGTCGTT CTCGGACAAC TACGGGCTGG GCATCCCCAA CTTTCTTTAC AACGTGCGAC CGGGTCAGTT TGACCGAGTG CTGATCTGCA CCGAAACCCC CAGGCAGGCC GTCCCCGCCG AGCTGATTGA AGCGCTGAAC GCCGAGGTGA TTTGCGATGA GTAA
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Protein sequence | MDSSAAFSNP TKLRADLLRG RLDVSVDSST IAPDSLFGFA ERRNPKRAFL FVSRVLGRHI PARPSVMLKS FQDLAHKIPV DLPGPVLVIG MAETAVGLGA GVHRAYSETH SDALYLVSTR HPTGTELFAR FEEEHSHASA HLIHLPADPA LRDMMLGARS LVLVDDEAST GKTFINLHQA LVEAGLSKIE RVVTCVLTDW SAGAVSTSMG AVAEQVSLLQ GSYSFDEDVS APLPDMPEVG TVAMGDWPLL TANDWGRMGV LAVADTLAPG LTVNKGERVL VVGTSEFVWR PFLLAERLEK AGADVHFSST SRSPIALGHA IDHALSFSDN YGLGIPNFLY NVRPGQFDRV LICTETPRQA VPAELIEALN AEVICDE
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