Gene PSPTO_0935 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0935 
Symbol 
ID1182564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp1013292 
End bp1014425 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content63% 
IMG OID637392312 
Producthypothetical protein 
Protein accessionNP_790774 
Protein GI28868155 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.720236 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACAGCA GCGCAGCTTT TTCCAACCCT ACAAAGCTTC GTGCTGATCT GCTTCGTGGT 
CGCCTCGACG TCAGCGTCGA TTCGTCCACC ATTGCCCCGG ATTCACTGTT CGGCTTCGCC
GAGCGGCGCA ATCCCAAACG CGCGTTTCTG TTCGTTTCGC GGGTGCTCGG GCGTCATATC
CCGGCGCGCC CGAGCGTAAT GCTCAAGAGT TTTCAGGACC TGGCGCACAA GATTCCGGTA
GACCTGCCAG GCCCGGTGCT GGTCATCGGT ATGGCCGAAA CAGCCGTGGG CCTGGGTGCC
GGTGTGCACC GTGCCTACAG CGAAACGCAT TCCGATGCGC TGTACTTGGT CAGCACGCGC
CATCCAACCG GCACCGAGCT GTTCGCCCGT TTTGAAGAAG AGCACAGCCA CGCCAGCGCG
CACTTGATTC ACTTGCCTGC CGATCCTGCG CTGCGCGACA TGATGCTCGG TGCACGTTCG
CTGGTGCTGG TCGATGACGA AGCGTCGACG GGCAAGACGT TCATCAATCT GCATCAGGCG
CTGGTCGAGG CCGGGCTGAG CAAGATCGAG CGGGTGGTGA CCTGCGTGCT CACTGATTGG
TCGGCAGGTG CGGTCAGCAC GTCGATGGGC GCGGTGGCTG AGCAGGTGTC GCTGTTGCAG
GGCTCGTATT CCTTTGACGA GGACGTCAGC GCGCCGCTGC CGGACATGCC GGAAGTCGGC
ACCGTTGCGA TGGGCGACTG GCCGTTGCTG ACCGCCAACG ACTGGGGGCG CATGGGCGTG
CTGGCGGTTG CCGATACGCT GGCGCCTGGC CTTACGGTAA ACAAGGGCGA GCGCGTTCTG
GTGGTCGGCA CCAGCGAGTT TGTCTGGCGT CCTTTTCTGT TGGCCGAGCG CCTGGAAAAA
GCCGGGGCTG ATGTGCATTT CAGCTCCACC AGCCGTTCGC CGATCGCGCT GGGGCATGCC
ATCGATCACG CGCTGTCGTT CTCGGACAAC TACGGGCTGG GCATCCCCAA CTTTCTTTAC
AACGTGCGAC CGGGTCAGTT TGACCGAGTG CTGATCTGCA CCGAAACCCC CAGGCAGGCC
GTCCCCGCCG AGCTGATTGA AGCGCTGAAC GCCGAGGTGA TTTGCGATGA GTAA
 
Protein sequence
MDSSAAFSNP TKLRADLLRG RLDVSVDSST IAPDSLFGFA ERRNPKRAFL FVSRVLGRHI 
PARPSVMLKS FQDLAHKIPV DLPGPVLVIG MAETAVGLGA GVHRAYSETH SDALYLVSTR
HPTGTELFAR FEEEHSHASA HLIHLPADPA LRDMMLGARS LVLVDDEAST GKTFINLHQA
LVEAGLSKIE RVVTCVLTDW SAGAVSTSMG AVAEQVSLLQ GSYSFDEDVS APLPDMPEVG
TVAMGDWPLL TANDWGRMGV LAVADTLAPG LTVNKGERVL VVGTSEFVWR PFLLAERLEK
AGADVHFSST SRSPIALGHA IDHALSFSDN YGLGIPNFLY NVRPGQFDRV LICTETPRQA
VPAELIEALN AEVICDE