| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0934 |
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| Symbol | |
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| ID | 1182563 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 1012077 |
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| End bp | 1013225 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637392311 |
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| Product | trypsin domain protein |
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| Protein accession | NP_790773 |
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| Protein GI | 28868154 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGCTTC TGGCGCCAGG TGCAAACACT GCTTTAGCTA ACGCCCACTG CTCCTGGAAC
CTGGAGAGCG GTACATCTTC GGTGTTCGGT GAATACGCCG CCGTGGCGCT GCTGGCAGTC
AACGAAAAAC GCCAGCCCAT GGGCGACCCG GCGCTGTTGC ATCAGGAACA GAGCTGGATG
GAGTGGAGCG GCGGCCCTCA GGATGTTGGC TGCACGCTCA AGCTGGACAG GCTCCCGGCG
GGCAGTGATC GCGTATTGCT GATGGTTTAC GTGTACGCCG CGATGGGCCC GATCCGCGAT
TTTGCCAGCC TGCGTCTCAA AGTGGATGCC AATATCGAGC ATCGCCTGGA CCTGCGCGAT
AACGGCGAAG CTGCGATCAT CATCGGCGAG TTCTACAAGC GCAACGACCA ATGGAAATTT
CGCGCGCTGA GCGAAGGCTC GGCGTATGGG CTGTCGGCGT TCGGCCGCAA GATCGGTCTG
GAAGTGGACG ATCGTCATCC GCGTCGTCCG TCTGGCGGGT CGGGTGGACC GGCGGGTGGT
CCACGGCACG AGTCGGCCAC CGGCACCGCG TTTGTGGTCG GGCCGGCGCA CGTCATGACC
TGCGCGCATG TCATCGAAGA CATGGGCGTG TTCTATATCA ATTCGCTGGA AGGCCGCTAC
AAGGCCGAGG CGGTGGTGAT CGACCGCCGC AACGATATCG CTTTGCTGCG GGTGCAAGGC
GCGCCGCCGT TGTCTGCGGT TACATTCCGC GAAGGGCAGG GCTGCGAACC GGGTGATACG
GTGGCGGTGC TGGGTTACCC ACTGGCGTCC ATTTCCGGCG GCGGGTTGCA GGTGACGCAG
GGCGGTATTT CCGGACTGTT CGGCCTGCAC AACGACGCCA GCCTGTTCCA GTTCACCGCG
CCCATTCAGC CCGGTTCCAG CGGCAGCCCA TTGTTCGACA ACGGCGGCGC AGTCATCGGC
ATGGTGACGT CCACGGTACC GGACGGGCAA AACATGAATT TTGCAGTGAA ATCCGCACTG
CTGATGTCCT TTCTACAGGC GTGCCGCATC GATGCGCCGC ATGCCCGAGC GGAAAGGTCG
TACACCACCA CAGAAATCTC ACGCACCTTC CAGTCATCGT TATGGCTCGT CGAAGCCTCT
CGCCAATGA
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| Protein sequence | MQLLAPGANT ALANAHCSWN LESGTSSVFG EYAAVALLAV NEKRQPMGDP ALLHQEQSWM
EWSGGPQDVG CTLKLDRLPA GSDRVLLMVY VYAAMGPIRD FASLRLKVDA NIEHRLDLRD
NGEAAIIIGE FYKRNDQWKF RALSEGSAYG LSAFGRKIGL EVDDRHPRRP SGGSGGPAGG
PRHESATGTA FVVGPAHVMT CAHVIEDMGV FYINSLEGRY KAEAVVIDRR NDIALLRVQG
APPLSAVTFR EGQGCEPGDT VAVLGYPLAS ISGGGLQVTQ GGISGLFGLH NDASLFQFTA
PIQPGSSGSP LFDNGGAVIG MVTSTVPDGQ NMNFAVKSAL LMSFLQACRI DAPHARAERS
YTTTEISRTF QSSLWLVEAS RQ
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