| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0917 |
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| Symbol | ndH |
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| ID | 1182546 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 998903 |
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| End bp | 1000201 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637392294 |
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| Product | NADH dehydrogenase |
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| Protein accession | NP_790756 |
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| Protein GI | 28868137 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1252] NADH dehydrogenase, FAD-containing subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCATC GTATTGTTAT CGTTGGCGGA GGCGCTGGCG GTCTGGAGCT GGCGACCAGT
CTGGGTAAAA CCCTGGGCAA GAAAGGTACG GCCAGCGTCA CGCTGGTGGA CGCCAACCTG
ACTCACATCT GGAAACCGCT GTTGCACGAA GTGGCTGCCG GTTCGCTCAA CTCTTATGAG
GACGAGCTGA ACTACGTGGC TCAGGCCAAG TGGAACCACT TTCAGTTTCA GCTCGGGCGC
ATGACCGGGC TGGATCGTGC CAGCCGCCAG ATCCATCTGG CGGCCACGCT GGATGAAACC
GGTGCCGAGC TGGTGCCGGC GCGCAGCCTG GGGTATGACT CGCTGGTGAT CGCAGTGGGC
AGCACCACCA ATGATTTCGG CACCACGGGC GCTGCGGAGC ACTGTCTGTT TCTCGACAGT
CGCAAGCAGG CCGAGCGCTT TCATCAGCAA CTGCTCAACC ACTACCTGCG TGCTCACGCG
GGCCAGGCAG ACAGTGCGCA GGAAATCACC GTTGCCATCG TTGGCGCAGG TGCAACCGGT
GTTGAGCTGG CGGCAGAGCT GCACAATGCA GCGCATGAAC TGGCGGCTTA CGGGCTGGGG
CAGATCAAGC CGGAAAACCT GCGCATCACG GTCATCGAGG CCGGGCCTCG GGTGCTGCCT
GCGTTGCCTG AGCGTATCGG TGCGCCGGTG CACAAGACGC TGGAAAAGCT TGGCGTCACC
GTGCTGACCA ATGCGGCGGT GAGTGAGGTG ACGGCCGATG GTTTGATCAC GGCCACCGGG
CAGGTTATTC CGGCGAGTTT GAAGGTCTGG GCAGCGGGTA TCCGTGCTCC GGCCTTTCTG
CATGAGCTGG ACGGGCTGGA GAGCAACCGC ATCAATCAGT TGCAAGTGCT GCCGACGCTG
CAAACTACCC GCGATGAAAA TATCTTCGCC TTCGGTGATT GCGCCGCCTG CCCGCAGAAA
GGCACTGATC GCAATGTCCC GCCGCGCGCT CAGGCGGCTC ACCAGCAGGC ATCGTTGCTG
GCCAAGTCGC TGCGCCTGCG GATAGAAGGC AAGACGTTGC CGGAGTACAC CTACAAGGAC
TACGGCTCGC TGATCTCGCT GTCAAGCTTC TCGGCAGTCG GCAATCTGAT GGGTAACCTC
ATGGGCAGCG TCATGCTTGA GGGCTGGTTG GCCCGAATGT TTTATGTGTC GCTATACCGC
ATGCACCAGA TGGCGCTGTA CGGCACTTTC CGCACCCTGA TGCTGATGCT GGGCAGCAAG
ATCGGCAAAG GGACAGAGCC GCGGATGAAG CTGCACTAA
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| Protein sequence | MTHRIVIVGG GAGGLELATS LGKTLGKKGT ASVTLVDANL THIWKPLLHE VAAGSLNSYE
DELNYVAQAK WNHFQFQLGR MTGLDRASRQ IHLAATLDET GAELVPARSL GYDSLVIAVG
STTNDFGTTG AAEHCLFLDS RKQAERFHQQ LLNHYLRAHA GQADSAQEIT VAIVGAGATG
VELAAELHNA AHELAAYGLG QIKPENLRIT VIEAGPRVLP ALPERIGAPV HKTLEKLGVT
VLTNAAVSEV TADGLITATG QVIPASLKVW AAGIRAPAFL HELDGLESNR INQLQVLPTL
QTTRDENIFA FGDCAACPQK GTDRNVPPRA QAAHQQASLL AKSLRLRIEG KTLPEYTYKD
YGSLISLSSF SAVGNLMGNL MGSVMLEGWL ARMFYVSLYR MHQMALYGTF RTLMLMLGSK
IGKGTEPRMK LH
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