| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0909 |
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| Symbol | |
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| ID | 1182538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 990834 |
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| End bp | 991340 |
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| Gene Length | 507 bp |
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| Protein Length | 168 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637392286 |
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| Product | chemotaxis protein CheD, putative |
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| Protein accession | NP_790748 |
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| Protein GI | 28868129 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG1871] Chemotaxis protein; stimulates methylation of MCP proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAAAAC CCGTCGGCGC GATCGAAATA GTCCTGGCAC CTGGCGAAGT GGTTTTTGAA
ACCCGGCCTG CGCGTTTACG CACATTGCTG GGTTCCTGCG TGGCGATCAC GTTCTGGCAC
CCCCAGCAGC ACATTGGCGG CATGTGTCAC TTCATGCTGC CTCACCGCCC TCACAAACAT
AAGGCACTGG ACGGCAGGTA CGGCGACGAA GCGCTGGAAA TGCTCATCCG CCACGCACTG
GCCAACCACA CAAAACCGCG GGACTATCAG GTCAAGCTGT TCGGCGGTGG ACAGATGTTT
CCCGAGCAGC AGAATGACTC GCAACAACTC AACGTGGCAG ATCTCAACGT GCATGCAGCG
CTGGCAATGG CAGAGCGCCA CCGGCTGCAA CTGAAGGCTC AGGACATGGG CCGCACCGGT
CATCGCACGA TCATATTCGA CCTGTGGGAC GGCAACGTCT GGGTCAAGCA TCAACCCATA
GAAGTGACTG AAAAAGATGC CAGGTAA
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| Protein sequence | MRKPVGAIEI VLAPGEVVFE TRPARLRTLL GSCVAITFWH PQQHIGGMCH FMLPHRPHKH
KALDGRYGDE ALEMLIRHAL ANHTKPRDYQ VKLFGGGQMF PEQQNDSQQL NVADLNVHAA
LAMAERHRLQ LKAQDMGRTG HRTIIFDLWD GNVWVKHQPI EVTEKDAR
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