| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0896 |
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| Symbol | |
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| ID | 1182525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 975585 |
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| End bp | 977240 |
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| Gene Length | 1656 bp |
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| Protein Length | 551 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637392272 |
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| Product | sensor histidine kinase/response regulator |
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| Protein accession | NP_790735 |
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| Protein GI | 28868116 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.406466 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTATTC TCTCCAGATG CAAAGACCTG GAAATGATCC AGGCACTGTT GCGCATGGCT
GTTATTGCTA CGTCGTCACT GTATGCGCTG ATCATGTATG CCCTGGACGA CATGTCTGCA
AACCGGATGT GGGTGATTCT GGGTTATTGC CTGGCCTTCG CTGTCGTCAA TGCAGGCCTG
ATCTGGCGTA TTGCAGTGCG ACCCGGCGCG TCCACGCGGC GCAGGATGTT CGCACTGGTT
GTCGACAACA TGGCCGGTAT CGTCACCATT ACCGTGGGTG GCGAGCCCAT GCTGCCGGTC
TATTCGGTCA TGCTGAGCAT GACGGTCGGC TACGGCATGC GCTACGGACG CAATTACCTG
TTGCTGGCCA CCGGTTTTGC CTTGGCATCG TTATGCCTGA TCATTCAGCT CACGCCCTTC
CTGCAGGAGC ATCCTGCCGT GGCGGTCATG ATGATCCTGA CAATGCTGGT GCTGCCATTA
TTCGTTTATT TCCTGCTCTC GCGACTGCAC ATTGCGTTGA ATGAAACCCA GGCGGCCAAC
GATGCCAAAT CACGTGTTCT TGCCCAGGCC AGCCATGACC TGCGCCAGCC GATCCACTCC
ATCAGCCTGT TTACTGCGTG CTTGCGCGAC GCATCACTGG GTGCGGACGA GCGCCGCCTG
GTGGATAACA TAGACCGGGC CTTGAGCGCC GTAGAACAGC TTTTTCGCTC GTTGCTGGAT
ATCTACACGC TGAACCAGGG TGAGGTTAAT CCACGCCTGG AAACCGTCGA TGTCGATGCG
TTATTGAGCG GGCTGGCCGG ACAGAACAGC GAAGCCGCCA ACTGGGCTGG GGTCGAGATC
CGTGTGCGCC CTTGCCGGCA ACATATACAC AGTGACCCGG CGCTGCTGCG CACCCTGCTG
CAGAACCTGA TGTCCAACGC CTTCAAATAT GCCCCGGGCA AACCGGTGCT GATGGCCTGC
CGACAGCGCG CCGGAAAATT GAGTATCGGT GTCTATGACA TGGGCCGTGG CATCCCGGCA
ACACACCTGC CGCATCTGTG CAACGAGTTT TATCGCGTGC GCGAAGAGCG CGATCAGGAC
ATCGAGGGCG TAGGGCTGGG GTTAAGCATC GTCAATCGGG TCGCCACGTT ACTGAACCTG
CACGTCGGGA TCAATTCACG CCTGGAGAAA GGCACAGCGG TTGTGCTCAG CGGGCTGCCG
ATCGTGAACG CACTTCAGGC CGCGCCCACG CCGGATATCG ACTGGAACAA ACACTTGCTG
GGCGGCTTGC GTGTGCTGTT GATCGAGGAC AACTACAACG TGCTGCAAGC GACCGCCATG
CTGCTGCGCA AATGGGGCTG CGACGTCCAG ACCGCCTCCG CCACCCCCGA GGCAAGCGTC
GATTGCGATC TGGTCGTCAC CGACTTCGAC CTTGACCGAA GTGCCACCGG CGCCGACTGC
ATCCGCTACC TGAGCGAACT GCATGGCCGA CGGATACCGG CCATCGTCAT CACCGGTCAT
GCGATCCAGC ATGTACAGCA ATCGCTGAAC GACCCACGGA TTCCGGTTTT GTCCAAACCG
GTACGACCTG CTGAACTGCG CTCGCTGTTG CTGAGTTTCA AGATGGATCT GCTGCAAACG
GCAACTCCCG ACAGGGCGTC CCTTGCCGGG CCATGA
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| Protein sequence | MSILSRCKDL EMIQALLRMA VIATSSLYAL IMYALDDMSA NRMWVILGYC LAFAVVNAGL
IWRIAVRPGA STRRRMFALV VDNMAGIVTI TVGGEPMLPV YSVMLSMTVG YGMRYGRNYL
LLATGFALAS LCLIIQLTPF LQEHPAVAVM MILTMLVLPL FVYFLLSRLH IALNETQAAN
DAKSRVLAQA SHDLRQPIHS ISLFTACLRD ASLGADERRL VDNIDRALSA VEQLFRSLLD
IYTLNQGEVN PRLETVDVDA LLSGLAGQNS EAANWAGVEI RVRPCRQHIH SDPALLRTLL
QNLMSNAFKY APGKPVLMAC RQRAGKLSIG VYDMGRGIPA THLPHLCNEF YRVREERDQD
IEGVGLGLSI VNRVATLLNL HVGINSRLEK GTAVVLSGLP IVNALQAAPT PDIDWNKHLL
GGLRVLLIED NYNVLQATAM LLRKWGCDVQ TASATPEASV DCDLVVTDFD LDRSATGADC
IRYLSELHGR RIPAIVITGH AIQHVQQSLN DPRIPVLSKP VRPAELRSLL LSFKMDLLQT
ATPDRASLAG P
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