| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0893 |
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| Symbol | |
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| ID | 1182522 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 972764 |
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| End bp | 974032 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637392269 |
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| Product | outer membrane protein P1, putative |
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| Protein accession | NP_790732 |
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| Protein GI | 28868113 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2067] Long-chain fatty acid transport protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.325084 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCAAGA GAACACTTGG CCTCACGGCT GCGCTGGCAT CCTCCCAAAT TCTTGCTGGC
GGTTTTGCGC GCACCGAGCA GAGCATCAGC GGCATGGGCG TCGGTCAGGC CGGACGCGCT
TCAATGGCGC AGGACGCCAG CACGGTCTAT GGCAACCCGG CGGGTATGGC GCGTCTTGAG
GGCAGGCAAA TCACGGCAGG TGTCACGTTC GTTGATGCAT CGACCGACAT CAGCCATGCA
GCCGGTCGTT CACGAGGCAG CAATGACGGC GACATGGTGC CGTTCAGCTC GGTTCCATTC
GGGTTTTACA CCCAGAAACT CGATGAGCAC TGGGCGTTTG GCCTGGGTAT CTATGCACCT
TTTGGTTTGT CGACTGACTA TGAAAATGGC TTTCAGGGGC GCATGTTTGC CAGCAAGAGC
GACCTCAAGG TGGTGACAGT GCAGCCCACG GTCAGCTACG CCTTCAACGA CAGGTTGTCG
ATTGGCGCAG GCCCCACGTT CAATCGAATT GCCGGGACGC TGGAGTCGGA TATCACGCTC
AATCCCGCCA TCGCCGACAC GCGCGTAAAA GTCAGCGGTG ATGACACGGC GGTAGGCTTC
AACATCGGCG TGCTGTTCAA TGCGACCGAC ACCACGCGTG TGGGGCTGAC GTACCATTCC
AAAGTCGATT ACAAACTTGG CTGCCATACG CAGGTCTCGA CCGGTGCCGG GACGCCACCG
CAGTTGCTCG CCAGCAATCG CTATGACTGT ACGTTGAAAG TGGCCACGCC AGAGTCATAC
GATCTTTCCG TTACTCAGAA ACTGAGTGAC GCCTGGACGC TTTATGCCAG TGCTACCCGA
ACCGGCTGGA GCAGCATGCA GGACCTGAGC CTTCGTAATC AGCCCGTTTC TGCTGCGCAG
GGAGGCTCCC TGGCATCAGC ACTGACGGGG TCTATTCAGG AAGGCCTGAA CTGGCACGAC
ACATGGGCTT ATGCCATCGG CACGGCCTAC CGGCTGGATC AACAGTGGGT ACTGCGTGCA
GGCGTGCTGT TCGATCAGTC GCCGACCAGC AACACTGATC GATCACCACG CACACCCACA
GGGGATCGCG AGGTATTCAG CGTCGGGGCT GGCTATGAGG TCACCCCGCA ACTGACTCTT
GATGTGGCTT ACTCTTATCT TCAGGAAGAA AGTGTCGATG TCAGCCGCGC CAATGCGCTA
GGCAGTTACA GTGCGACGTA TCAGAGCCAT GCGAATTTAC TCGGCGTTGG CGCGACCTAT
CGTTTCTGA
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| Protein sequence | MLKRTLGLTA ALASSQILAG GFARTEQSIS GMGVGQAGRA SMAQDASTVY GNPAGMARLE
GRQITAGVTF VDASTDISHA AGRSRGSNDG DMVPFSSVPF GFYTQKLDEH WAFGLGIYAP
FGLSTDYENG FQGRMFASKS DLKVVTVQPT VSYAFNDRLS IGAGPTFNRI AGTLESDITL
NPAIADTRVK VSGDDTAVGF NIGVLFNATD TTRVGLTYHS KVDYKLGCHT QVSTGAGTPP
QLLASNRYDC TLKVATPESY DLSVTQKLSD AWTLYASATR TGWSSMQDLS LRNQPVSAAQ
GGSLASALTG SIQEGLNWHD TWAYAIGTAY RLDQQWVLRA GVLFDQSPTS NTDRSPRTPT
GDREVFSVGA GYEVTPQLTL DVAYSYLQEE SVDVSRANAL GSYSATYQSH ANLLGVGATY
RF
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