| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0884 |
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| Symbol | |
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| ID | 1182513 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 960352 |
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| End bp | 961344 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637392260 |
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| Product | transcriptional regulator, LacI family |
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| Protein accession | NP_790723 |
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| Protein GI | 28868104 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.45098 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTCAG TTAAAGACGT TGCACGATTG GCCGGTGTGT CCCTGATGAC GGTGTCTCGA
GCGCTCAATA ATCCGGAAAA ACTGAGCCCC GAGACGTATC AGCGCGTCCG TAGCGCGATT
GACGAGCTGC AATTCGTACC CAGCCTGTCG GCGCGCAGGA TTCGCGGTGA CAACTTGCAG
ACACGAACCA TCGGAGTGTT TGCCCTGGAC ACCGCGACGA CACCGTTTGC GGTCGAGCTG
CTGCTGTCAA TTGAGCAGAC CGCGCAGCAA GCAGGCTGGA ACGTGTTTAT CCTCAACCTG
CTGAGCAACC CGCCCACCGA CCAGAATATC GACCTGATGC TGTCGCACCG ACCCGACGGG
TTGATCTTCA GCGCCATGGG GTTGCGTGAA GTGAGTATTC CTCAGCGCCT GAAGAGCAAA
CCGCTGGTGC TTGCCAATTG CGTAGCCGAT GACAGCAGCC TTGTCAGTTA TGTGCCGGAT
GACGAAACAG GTCAGTACCG CGCCTTGCAC CACGCGTTCA ACCAGGGTTA TCGACGCCCG
CTGTTTATCA ACCTGCCAAA ACAGAGCCTG GCCTGGGAAA TCCGGCAAGC GGGTATGCAG
CGTGCCTGCC TGGCATTCGG CTTGGCTGCA GACGAACACA TGCAGTACAA CCTGTCCGAA
CATGACGCCT ATTGGGAAAC CGCCGCCATC CTCGAACGGC ACATGATCGA TGGCCGTCCG
CAGTTCGACA TTCTGGTCTG CGGCAATGAC CGCATTGCCT TCTGCGCCTA CCAGTTGTTG
CTGGGTCGAG GCCTGAAAAT CCCCGCAGAT GTCGCCGTAC TGGGTTATGA CAACATGATC
GGCATCGCCG AACTGTTCAT CCCTGCGCTG ACCACAGTGC AGTTGCCGTA TTACGAAATC
GGGCGCAATG CCGCCCGGCA CTTGATAGAA GGCCTCGACG TATCGGGAAC TCAGCCAGTG
GATTGCCCGC TGGTGGTCAG GGAATCGTTA TGA
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| Protein sequence | MTSVKDVARL AGVSLMTVSR ALNNPEKLSP ETYQRVRSAI DELQFVPSLS ARRIRGDNLQ
TRTIGVFALD TATTPFAVEL LLSIEQTAQQ AGWNVFILNL LSNPPTDQNI DLMLSHRPDG
LIFSAMGLRE VSIPQRLKSK PLVLANCVAD DSSLVSYVPD DETGQYRALH HAFNQGYRRP
LFINLPKQSL AWEIRQAGMQ RACLAFGLAA DEHMQYNLSE HDAYWETAAI LERHMIDGRP
QFDILVCGND RIAFCAYQLL LGRGLKIPAD VAVLGYDNMI GIAELFIPAL TTVQLPYYEI
GRNAARHLIE GLDVSGTQPV DCPLVVRESL
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