Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0881 |
Symbol | |
ID | 1182510 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 952643 |
End bp | 953524 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637392257 |
Product | hypothetical protein |
Protein accession | NP_790720 |
Protein GI | 28868101 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATGGGA GGAAAATTCC GCTCAGGTAC GCCAACGATC CTCGACCGAT CTTTGACTGG ATGCAGGTGG TCCGCAAAAA GGCCGTGGTC TATATCGGCC TGGACGCCTT GTCGGACACG GAGGTCGCCG CTGCCGTCGG CAACTCGATG TTCTCCGACC TGGTCTCGGT CGCTGGCCAT ATCTACAAGT TCGGCGTCGA CGACGGGTTA CCGGGTAGCG TCCCTGGCAC CAAAGTGCCT ATCAACCTCC ACGCCGATGA GTTCAACGAG CTGATGGGTG AGGAATTCAT TCCGATGATC AACAAGGGTG GCGGTGCCGG CATGCAGGTG ACTGCCTACA CCCAGACCAT GAGCGATATC GAGGCGAAGA TCGGTAACAA AGCGAAGGCT GGCCAGGTGA TCGGTAACTT CAACAACGTG TTCATGCTGC GCGTCCGTGA AACATCCACC GCCGAGCTGC TCACAAACCA GTTACCTAAG GTTCAGGTTT TCACGTCCAC ACCGGCCAGC TCGGCTAATG ACAGTGCAAC GGGCAACACC GCGTTCACGT CCTCCAGTCA TGACCAGGTG CAGCAGGTCA GCGTGCCCAT GATTGAGCCC GCGCATGTCG TGGGCCTGCC CAAGGGCCAA TGCTTTGCGC TCATGGAAGG CGGCAATCTG TGGAAAATCA GAATGCCTTT GCCTGGACAT GATCCTGATG AGGTGATGCC GGCAGATCTG CAGGCCCTGG CGGAAAGCAT GCGTCAGACC TATCAGGTGG GCAAGGTCGA CGACACGGGT TGGTGGTCCG CGCCTGGTTA TCAGACGCTC AACGAGTCCC TGCCTGCAGA TCTGCTCGAC GACTTCAAAA AAATCGCTGT TGCACCTGAG GATGCGGCAT GA
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Protein sequence | MHGRKIPLRY ANDPRPIFDW MQVVRKKAVV YIGLDALSDT EVAAAVGNSM FSDLVSVAGH IYKFGVDDGL PGSVPGTKVP INLHADEFNE LMGEEFIPMI NKGGGAGMQV TAYTQTMSDI EAKIGNKAKA GQVIGNFNNV FMLRVRETST AELLTNQLPK VQVFTSTPAS SANDSATGNT AFTSSSHDQV QQVSVPMIEP AHVVGLPKGQ CFALMEGGNL WKIRMPLPGH DPDEVMPADL QALAESMRQT YQVGKVDDTG WWSAPGYQTL NESLPADLLD DFKKIAVAPE DAA
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