Gene PSPTO_0880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0880 
Symbol 
ID1182509 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand- 
Start bp951854 
End bp952603 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content57% 
IMG OID637392256 
Producthypothetical protein 
Protein accessionNP_790719 
Protein GI28868100 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGACG TTGCCGATCG CGCGAAACAG CAACAAGACC ACGAACAGTC TTTCATAGGA 
TCTCTCTTCA CCCTGCCCTT CCGATTCGCG GCAGTAATGT TCCTCTCTCT GGGGGGAGCC 
ATCATCGTCG AATGGATCTG CATGTACTTC TTCTGGCCGG AGGCCGGTTG GCAGCATGCT 
CGTGCAATGC TCGATCATGA ACTCAGCTGG CTCTCCAAGG GGTTCCTGCA GAGTGTGGTT 
GTTCAAGAGC CTGGCCGAAC AGCGACATGG CTGGTTCAAA CCACGTATGA CTGGCTGGTG 
GTCAAGACGG GGCTTCAGAC CTGGGTTCAA CACACCTCTG ATTATGCTGC GACAGGAGAA 
CGATCACGCG GTTTCGACGT GCGATACATG CTCGGCGTGG GAGTCAGCAA GTTTCAGGAT 
TACGGCCTTG CGGCGCTCTA CACGACACTG GTGTTTTGCG TGCGTCTGGT GATCCTGACC 
CTCGCAATCC CGTTATTTGT GATGACGGCG TTTGTTGGTT TTGTGGACGG ACTGGTGCGC 
AGAGACTTGC GGCGGTTCGG TGCCGGCCGT GAGTCCAGCT ACCTGTATCA CAAAGCTCGA 
GCAACGATGG TGCCGCTGGT GATCATCCCC TGGAGCCTTT ACCTGGCTCT GCCATTCAGC 
GTGAGCCCTT TGCTAGTGCT CCTGCCATGC GCGGCACTGC TCGGCCTGGC GGTCAGCATT 
ACGGCGTCCA GCTTCAAAAA ATACCTCTAG
 
Protein sequence
MADVADRAKQ QQDHEQSFIG SLFTLPFRFA AVMFLSLGGA IIVEWICMYF FWPEAGWQHA 
RAMLDHELSW LSKGFLQSVV VQEPGRTATW LVQTTYDWLV VKTGLQTWVQ HTSDYAATGE 
RSRGFDVRYM LGVGVSKFQD YGLAALYTTL VFCVRLVILT LAIPLFVMTA FVGFVDGLVR 
RDLRRFGAGR ESSYLYHKAR ATMVPLVIIP WSLYLALPFS VSPLLVLLPC AALLGLAVSI 
TASSFKKYL