| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0871 |
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| Symbol | |
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| ID | 1182500 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 939884 |
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| End bp | 941068 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637392248 |
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| Product | macrolide efflux protein, putative |
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| Protein accession | NP_790711 |
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| Protein GI | 28868092 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTTTCT CCGGTCAGAC TCTTTCCCCG ATCGGCTCCG GGCTGACCCA GTTCGTTCTC
CTTTGGTGGA TTACAGACAC AACAGGTAGT CTGGCAGCGC TGGCAACCGC TGGGGTCGTA
GCGCTCTTGC CGCAGGCGCT GATCAGCCCT CTGGGAGGCA TATTTGCTGA CCGCTACAGT
CGCCGCGTGT TGATGATTGC CACCGATATG ATCAGCGCGC TGTGCATGTC GATATTGATT
GTACTGTTTC TTACCGAGCG TGTTGAACTG TGGCACATTT ACTGGATGAT GTTCGTACGC
AGCGCGATGC AGGCGTTCCA GACGCCGGCC GCATCGGCTA GTGTTGCTAT GCTTGTGCCA
CGCAGTTTTT TACCCCGTGC AGCGGGTTTG AGTCAGGCCA TGCAGGGAAT AAGCCTGGTT
GCTGCCGCAC CGCTAGGCGC GCTCGCTATC AGCATGATCC CGCTGGGATG GGCACTGTCC
ATCGATGTGG TGACAGCACT ATTGGGCTGC TTGCCGTTGT TGCGCTACCG TATTCCCCAG
GCATCCAATA GCAACCGCAC GGGCCTATCA ACTCTAAGGA GTGAGTTTCG CGATGGCTTG
CATTTGATCT GGAGTCACCC TGGCTTGCGC CGCCTCTATG CGTTGATGGG GGCCGTGGTA
CTTGTGATTA TGCCTTCGTT CACATTGGTG CCATTGTTGG TCAAAGAGCA CTTCGGCGGT
GGTGCGCCGC ACGTTGCGTT TATTGATGCG ATGGCAGGCG CTGGCATGTT GGTAGGGGGC
GTAGTTGTGG CGCTATTTGC GCCTCGCCAG CCAGTCACAT GGATCCTCTG GGGCTTCGCT
ACCTCATGTT TCGCGCTAGC ATTAACAGGT CTGATGCCGG CCGACCGCTT CAACATCGCC
GCAGTGTGTT GGATGGTTAG TGGCATGTCC TTCATTCTAG GCGATGCCCC AATGACTGCA
TTGCTGCAAA GCAGCATCCC CAATCACCTG CAAGGGCGTG GTCTTTCGTT GCTGAATATG
GTCATGGGGC TAGCCGCTCC ACTAGGTTTG GCACTGACAA CTCCACTAGG TGAGCTTATC
GGCGTGCGAT GGCTGTTTGT CGTTACCGGC GTGTTAGGCG GACTGATTTG CCTGATGGGA
TTTTTTTCAA CCGCCGTGCG CCGTCTTGAA GACGGCACGC ACTAG
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| Protein sequence | MIFSGQTLSP IGSGLTQFVL LWWITDTTGS LAALATAGVV ALLPQALISP LGGIFADRYS
RRVLMIATDM ISALCMSILI VLFLTERVEL WHIYWMMFVR SAMQAFQTPA ASASVAMLVP
RSFLPRAAGL SQAMQGISLV AAAPLGALAI SMIPLGWALS IDVVTALLGC LPLLRYRIPQ
ASNSNRTGLS TLRSEFRDGL HLIWSHPGLR RLYALMGAVV LVIMPSFTLV PLLVKEHFGG
GAPHVAFIDA MAGAGMLVGG VVVALFAPRQ PVTWILWGFA TSCFALALTG LMPADRFNIA
AVCWMVSGMS FILGDAPMTA LLQSSIPNHL QGRGLSLLNM VMGLAAPLGL ALTTPLGELI
GVRWLFVVTG VLGGLICLMG FFSTAVRRLE DGTH
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