Gene PSPTO_0863 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0863 
Symbol 
ID1182492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand- 
Start bp934867 
End bp935535 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content59% 
IMG OID637392241 
Producthypothetical protein 
Protein accessionNP_790703 
Protein GI28868084 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCGTT ATTTAAAGCT GGCCGACTCG CAGCGGGCGC ACATCACCAG CTTGAGGATG 
GCCATCGTCC TGCTGGCGCT CCTGGCCCTG GGGCTGGGTA TCGGCTGGTA TCGAGCACCG 
CAGAACATGA CCATTCACGT TCCGCCCGAC CTGCGTTCCG GCAGCACACG CCTTTGGTGG 
GACATCCCTC CTCAGTCGGT GTACGCCTTT GGCCTGTACA TCTTTCAGCA AATGAACCGC 
TGGCCGGTCG ACGGTGAACA GGATTATCAG ACGAACATCA CGCGCCTGGA CGCTTACATT 
ACACCGGCTT GCAAGCAATA CCTGCAGAGC GATTTTGATC TGCGCAAGTC CAGCGGTGAG 
CTGCGCAAGC GTGTCCGCGG TGTCTACGAG ATTCCCGGCC GAGGCTTTGG CGACTCGCCT 
GAACTGCGGA CGGTGACCAA CTCCATCGAC GACTGGACGG TGACGCTCGA CATCTCAGCC 
GACGAGTATT ACGGCGGTCA GCTGGTCAAG CGTGCCCTCG CACGATACCC GCTTCACGTT 
GTACGCATGG ACGTCGACCC TGAAACCAAT CCCTTCGGCT TGGCATGGGA CTGCTACAAC 
GGCGCGCCAC AACGCATCGA GGGCAACGTC GAAACTCCCG CAGCTCCATC GAAAGGAGTC 
TTCAAATGA
 
Protein sequence
MSRYLKLADS QRAHITSLRM AIVLLALLAL GLGIGWYRAP QNMTIHVPPD LRSGSTRLWW 
DIPPQSVYAF GLYIFQQMNR WPVDGEQDYQ TNITRLDAYI TPACKQYLQS DFDLRKSSGE 
LRKRVRGVYE IPGRGFGDSP ELRTVTNSID DWTVTLDISA DEYYGGQLVK RALARYPLHV 
VRMDVDPETN PFGLAWDCYN GAPQRIEGNV ETPAAPSKGV FK