Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0851 |
Symbol | |
ID | 1182480 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 919701 |
End bp | 920189 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637392228 |
Product | hypothetical protein |
Protein accession | NP_790691 |
Protein GI | 28868072 |
COG category | [S] Function unknown |
COG ID | [COG3477] Predicted periplasmic/secreted protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAAACTC GTGAATATTA TGTCGCGGCA GCGGCCGGCC TAATTGGAGG TAACGTTTCT AGCTTTGTCA AGTGGGGGAC GGAAATCCCA TTTCCGCCTC GCACACCAGA TCGTCCGATC CCGCCTTTAG AGATGCTTGA TTCGCTCGGT ATCAACGCTA ATCAGCTTAC CTACGTGTAC TCCGAGCACA TGGTGAATTA TGGCAGTGCC TTGATTCACC AAAGCTTTTC CATTTTTTTC GCCATCTTCT ATTGCCTGAC TGCGCTTAGG TATCCGCGTG TTGCCGTATG GCAAGGTTTT GGCTTTGGCA TGCTTGTCAC CTTGGCTTTT CACGGGGTAC TTTTACCGAT GTTTCACTGG GCTCCTCCGC TCTGGGAGCT TCCTCCAGCG GAATGGGCAT CTGAAACCTT TGGACACTTG CTATGGATAT GGGTGATCGA AGTCATACGT CGCGATCTGC AGCAACGTTG GTCGCCCGGC CCTGGTTAG
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Protein sequence | MKTREYYVAA AAGLIGGNVS SFVKWGTEIP FPPRTPDRPI PPLEMLDSLG INANQLTYVY SEHMVNYGSA LIHQSFSIFF AIFYCLTALR YPRVAVWQGF GFGMLVTLAF HGVLLPMFHW APPLWELPPA EWASETFGHL LWIWVIEVIR RDLQQRWSPG PG
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