Gene PSPTO_0851 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0851 
Symbol 
ID1182480 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp919701 
End bp920189 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content52% 
IMG OID637392228 
Producthypothetical protein 
Protein accessionNP_790691 
Protein GI28868072 
COG category[S] Function unknown 
COG ID[COG3477] Predicted periplasmic/secreted protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAACTC GTGAATATTA TGTCGCGGCA GCGGCCGGCC TAATTGGAGG TAACGTTTCT 
AGCTTTGTCA AGTGGGGGAC GGAAATCCCA TTTCCGCCTC GCACACCAGA TCGTCCGATC
CCGCCTTTAG AGATGCTTGA TTCGCTCGGT ATCAACGCTA ATCAGCTTAC CTACGTGTAC
TCCGAGCACA TGGTGAATTA TGGCAGTGCC TTGATTCACC AAAGCTTTTC CATTTTTTTC
GCCATCTTCT ATTGCCTGAC TGCGCTTAGG TATCCGCGTG TTGCCGTATG GCAAGGTTTT
GGCTTTGGCA TGCTTGTCAC CTTGGCTTTT CACGGGGTAC TTTTACCGAT GTTTCACTGG
GCTCCTCCGC TCTGGGAGCT TCCTCCAGCG GAATGGGCAT CTGAAACCTT TGGACACTTG
CTATGGATAT GGGTGATCGA AGTCATACGT CGCGATCTGC AGCAACGTTG GTCGCCCGGC
CCTGGTTAG
 
Protein sequence
MKTREYYVAA AAGLIGGNVS SFVKWGTEIP FPPRTPDRPI PPLEMLDSLG INANQLTYVY 
SEHMVNYGSA LIHQSFSIFF AIFYCLTALR YPRVAVWQGF GFGMLVTLAF HGVLLPMFHW
APPLWELPPA EWASETFGHL LWIWVIEVIR RDLQQRWSPG PG