| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0829 |
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| Symbol | clpB |
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| ID | 1182454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 895919 |
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| End bp | 898483 |
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| Gene Length | 2565 bp |
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| Protein Length | 854 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637392208 |
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| Product | clpB protein |
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| Protein accession | NP_790675 |
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| Protein GI | 28868056 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR03346] ATP-dependent chaperone ClpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTATCG ACAGATTGAC CAGTAAATTA CAGTTAGCGT TATCGGATTC CCAGTCGCTG
GCCGTCGGCC TCGACCATCC CGCCATCGAG CCTGCGCATT TGATGCAGGC ACTGCTCGAA
CAGCAGGGCG GTTCCATCAA GCCATTGCTG CTGCAAGTCG GCTTCGATAT CAACAGCCTG
CGCAAGGAAC TGAGCGCTGA GCTGGACCGA CTGCCCAAAA TCCAGAACCC GACCGGCGAC
GTGAATATGT CGCAGGACCT GGCGCGCCTG CTCAATCAGG CCGACCGCCT GGCGCAGCAG
AAGGGCGATC AGTTCATTTC CAGCGAGCTG GTGCTGCTCG CTGCAATGGA TGAGAACAGC
AAGCTCGGCA AGTTGTTGCT GGGGCAGGGC GTCAGCAAGA AGGCCCTGGA AAATGCCATC
AATAACCTGC GCGGCGAAGG TGCCGTCAAT GACCCGAACA TCGAAGAGTC GCGTCAGGCG
CTCGACAAGT ACACCGTTGA CCTGACCAAG CGCGCCGAAG AGGGCAAGCT AGACCCGGTG
ATTGGCCGTG ATGACGAGAT CCGTCGCACC ATTCAGGTTC TGCAACGCCG AACCAAAAAC
AATCCGGTGC TGATCGGTGA GCCCGGTGTG GGTAAAACCG CCATCGCCGA AGGTCTGGCG
CAGCGCATCA TCAATGGCGA GGTGCCGGAT GGCCTGCGCG GCAAGCGTCT GCTGTCGCTG
GACATGGGCG CACTGATTGC CGGTGCCAAG TACCGTGGCG AGTTCGAAGA GCGCTTGAAG
TCGCTGCTCA ACGAGCTGTC CAAGCAGGAA GGCCAGATCA TCCTGTTCAT CGACGAATTA
CACACCATGG TCGGCGCGGG CAAGGGCGAG GGCTCGATGG ACGCGGGCAA CATGCTCAAG
CCGGCACTGG CTCGGGGCGA GTTGCACTGC GTCGGCGCCA CCACGCTCAA CGAGTACCGC
CAATATATCG AGAAGGACGC CGCGCTTGAG CGTCGTTTCC AGAAAGTGCT GGTGGACGAG
CCGAGCGAAG AGGACACCAT TGCAATTCTG CGTGGCCTGA AAGAGCGCTA TGAAGTGCAT
CACAAGGTTG CGATCACCGA CGGCGCGATC ATCGCTGCGG CCAAGCTGAG CCATCGCTAC
ATCACCGATC GTCAGTTGCC GGACAAGGCC ATTGACCTGA TTGACGAAGC GGCCAGCCGC
ATTCGCATGG AGATCGACTC CAAGCCCGAA GTGCTCGACC GTCTTGAGCG ACGTCTGATT
CAGCTGAAAG TCGAAGCTCA GGCGCTCAAG AAGGAAAAGG ACGAGGCAGC CATCAAACGC
CTGGAAAAAC TCCAGGAAGA AATCGTGCGC CTTGAGAAGG AATACGCCGA TCTCGAAGAA
ATCTGGACTT CGGAAAAAGC CGAAGTCACC GGTTCTGCGC AGATCCAGCA GAAAATAGAG
CAGTCCCGTC AGGAACTGGA AGCGGCGCGT CGCCGTGGCG ACCTGAACCG CATGGCCGAG
TTGCAGTACG GCATCATCCC GGACCTGGAA CGCAGCCTGC AAATGGTCGA TCAGCACGGC
AAGCCCGAGA ACCAGTTGCT GCGCAGCAAA GTGACCGAAG AAGAAATTGC CGAAGTCGTC
TCCAAATGGA CCGGTATTCC TGTGTCGAAG ATGCTGGAGG GCGAGCGCGA GAAGCTGTTG
CGCATGGAAA CCCTGCTGCA TAACCGGGTG ATCGGTCAGG AAGAGGCGGT AGTGGCGGTT
TCCAACGCCG TGCGGCGCTC GCGTGCCGGG TTGTCCGACC CTAATCGCCC AAGCGGCTCG
TTCATGTTCC TCGGCCCCAC CGGCGTGGGT AAAACCGAAC TGTGCAAGGC GCTGGCCGAA
TTTCTGTTCG ACACCGAAGA GGCGATGGTG CGAATCGACA TGTCCGAGTT CATGGAGAAA
CATTCCGTGG CTCGCCTGAT CGGTGCACCA CCCGGCTATG TCGGTTACGA AGAGGGCGGC
TACCTGACCG AAGCCGTGCG TCGCAAGCCG TACTCGGTGA TCCTGCTCGA TGAGGTGGAG
AAGGCGCACT CCGATGTCTT CAACATCCTG CTGCAGGTGC TTGAAGACGG ACGCCTGACC
GACAGCCACG GGCGGACAGT GGATTTCCGT AATACCGTGA TCGTCATGAC CTCCAACCTG
GGCTCGGCGC AGATCCAGGA ACTGGTGGGT GATCGCGAGG CGCAGCGTGC GGCGGTAATG
GACGCAGTCA GCACGCACTT CCGTCCGGAG TTCGTCAACC GGATCGACGA GGTGGTGATC
TTCGAGCCCT TGGCGCGTGA TCAGATTGCC GGTATCACCG ATATCCAGCT TGGCCGTCTG
CGCAAGCGTC TGGCCGAGCG CGAGCTGACA ATGGTGCTGA GCCCCGAGGC GCTCGACAAG
CTGATTGCCG TCGGTTACGA CCCGGTCTAT GGCGCACGGC CACTCAAGCG CGCCATTCAG
CGCTGGATCG AAAACCCGCT GGCGCAACTG ATCCTCTCGG GTGGCTTCGA GCCGGGCAGC
AGCATCACCG GCAAGGTGGT CGACGACGAG ATCGTGTTTG GCTGA
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| Protein sequence | MRIDRLTSKL QLALSDSQSL AVGLDHPAIE PAHLMQALLE QQGGSIKPLL LQVGFDINSL
RKELSAELDR LPKIQNPTGD VNMSQDLARL LNQADRLAQQ KGDQFISSEL VLLAAMDENS
KLGKLLLGQG VSKKALENAI NNLRGEGAVN DPNIEESRQA LDKYTVDLTK RAEEGKLDPV
IGRDDEIRRT IQVLQRRTKN NPVLIGEPGV GKTAIAEGLA QRIINGEVPD GLRGKRLLSL
DMGALIAGAK YRGEFEERLK SLLNELSKQE GQIILFIDEL HTMVGAGKGE GSMDAGNMLK
PALARGELHC VGATTLNEYR QYIEKDAALE RRFQKVLVDE PSEEDTIAIL RGLKERYEVH
HKVAITDGAI IAAAKLSHRY ITDRQLPDKA IDLIDEAASR IRMEIDSKPE VLDRLERRLI
QLKVEAQALK KEKDEAAIKR LEKLQEEIVR LEKEYADLEE IWTSEKAEVT GSAQIQQKIE
QSRQELEAAR RRGDLNRMAE LQYGIIPDLE RSLQMVDQHG KPENQLLRSK VTEEEIAEVV
SKWTGIPVSK MLEGEREKLL RMETLLHNRV IGQEEAVVAV SNAVRRSRAG LSDPNRPSGS
FMFLGPTGVG KTELCKALAE FLFDTEEAMV RIDMSEFMEK HSVARLIGAP PGYVGYEEGG
YLTEAVRRKP YSVILLDEVE KAHSDVFNIL LQVLEDGRLT DSHGRTVDFR NTVIVMTSNL
GSAQIQELVG DREAQRAAVM DAVSTHFRPE FVNRIDEVVI FEPLARDQIA GITDIQLGRL
RKRLAERELT MVLSPEALDK LIAVGYDPVY GARPLKRAIQ RWIENPLAQL ILSGGFEPGS
SITGKVVDDE IVFG
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