| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0826 |
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| Symbol | |
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| ID | 1182451 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 892888 |
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| End bp | 893904 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637392206 |
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| Product | competence lipoprotein ComL, putative |
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| Protein accession | NP_790673 |
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| Protein GI | 28868054 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4105] DNA uptake lipoprotein |
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| TIGRFAM ID | [TIGR03302] outer membrane assembly lipoprotein YfiO |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAACACC TGCTGCTGAT CGCCATCCTC GCATTGACTG CGGCCTGTTC GTCGAAGGAA
GTCATCGACG AAAACCTCAG CGAAGTCGAG CTGTACCAGC AGGCGCAGGC CGACCTGGGA
AATAACAGCT ATAACAGCGC CACGGAGAAG CTCAAGGCGC TGGAATCACG CTATCCGTTC
GGTCGCTATG CCGATCAGGC CCAGCTCGAG TTGATCTACT CGAACTACAA GAATGGTGAA
CCCGAAGCAG CCAAATCCGC TGCCGAGCGT TTCATTCGCC TGCATCCGCA GCACCCGAAC
GTCGATTACG CCTACTACAT GAAGGGCCTG ACTTCCTTCG ACCAGGACGT TGGCCTGCTG
GCCCGCTTCC TGCCGCTGGA CCAGACCAAG CGTGACCCCG GTGCTGCCCG CGACTCGTTC
AACGAGTTCG CCCAGCTGAC CAGCCGCTAC CCCAACAGCC GTTATTCGCC TGATGCCAAG
CAGCGCATGA TTTACCTGCG CAACCTGCTG GCCTCCTACG AAATCCACGT GGCCGACTAT
TACCTGACCC GTCAGGCCTA TGTCGCCGCC GCCAACCGTG GCCGTTACGT GGTGGAAAAC
TTCCAGGAGA CGCCATCGGT CGGCGACGGC CTGGCTGTCA TGGTCGAGTC CTATCAGCGT
CTGCACCTTG ACGACCTCGC GGCCACCAGC CTCGAAGTGC TGAAGACCAA CTACCCGAAT
CACCCTCAAC TGGTGGACGG CAAGTTCAAC CCGCGTCAGG CCGAAGCCGA TAACCGCTCA
TGGCTGTCGA AAGCGACCCT TGGCCTGATC GACGGCAGCG CGCCGCTGCC ACCAGGCCAG
ACCCGTGCCG ATCAGGACAT CAAGAAGCAG TATCAGGACG CCAAGGACTC CATCCCGAAA
GAGCTGTTGC CGGAAAATCA GGCAGAGCTG GACGAGCAGG CGGAAAAAGA CGCCGAAGCG
AAAGGCACCA AAAGCCGCTC GTGGTTCAGC TACATGACCC TGGGTCTGTT CGACTGA
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| Protein sequence | MKHLLLIAIL ALTAACSSKE VIDENLSEVE LYQQAQADLG NNSYNSATEK LKALESRYPF
GRYADQAQLE LIYSNYKNGE PEAAKSAAER FIRLHPQHPN VDYAYYMKGL TSFDQDVGLL
ARFLPLDQTK RDPGAARDSF NEFAQLTSRY PNSRYSPDAK QRMIYLRNLL ASYEIHVADY
YLTRQAYVAA ANRGRYVVEN FQETPSVGDG LAVMVESYQR LHLDDLAATS LEVLKTNYPN
HPQLVDGKFN PRQAEADNRS WLSKATLGLI DGSAPLPPGQ TRADQDIKKQ YQDAKDSIPK
ELLPENQAEL DEQAEKDAEA KGTKSRSWFS YMTLGLFD
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