| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0824 |
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| Symbol | pilS |
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| ID | 1182449 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 890930 |
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| End bp | 892525 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637392204 |
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| Product | sensor protein PilS |
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| Protein accession | NP_790671 |
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| Protein GI | 28868052 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.1537 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCGCTG AGACGCCTTC GCTTACCAGC CCGCAGGCGC AACGGATTCT GCGGCTGTAT
CACCTTTATC GACTGACCAT TGGCGTCGTG CTGGTTCTGT TGATCTCCAG CAGCCTGGAA
ACCGAGTTGC TGCAACTGGC CAATCCGAAT CTGTTCCGTT CGGGCTGCTG GCTGTACCTG
GTGTTCAACA TTCTGGTGGT GGTGCTGCTG GAGCGCCCCA GCCGCCAGGC GCAGCTGTTT
GGCTTGGCGA TGACCGACGC AATCATGCTT TCCGGGCTGT TTTATGCGGC CGGCGGGCCG
TCGAGCGGCA TCGGCAACCT GTTGATCGCA TCCGTGGCGA TCAGCAACGT GCTGCTGCGA
GGCCGCATCG GCCTGTTGAT CGCTGCTGTT TCTGCCATTG GCATCATCTA CCTGACGTTC
TACATCAGCT TCGGCACACC TTCGGTGTCC AACGACTACG TGCAGGCCGG TTCTCTGGGT
GCGCTGTGCT TCGCCGCCGC GCTGTTGGTG CAGGCACTGA CTGCGCGCCT GCAAGTCAGC
GAGGGGCTGG CCGAGCAACG GGCAGCGGAT GTCGACAGCC TTGAAGAGCT CAATGCGCTG
ATCCTGCAGC GCATGCGCAC AGGCATTGTG GTACTGGATG CGCGCCGCCA GGTGGTGCTG
GCCAATCAGG GGGCCTTGAC CCTGCTCGGC CATGAACGAT TGGTCGGTCA GGTCATCGAC
GCTTACTCGC CGCAGTTGGT CGAGCGCCTG CGCCAGTGGC TGATCAACCC GATCATGGTG
CCGCGCAGCA TCACCACCTC ATCTATCGGG CCTGTGCTGC AACCCAGCTT TGCCGCGCTC
AATCGGGGCG ACCAGCGTCA AACGCTGATC TTCCTTGAAG ATCTGTCGCA GATTGCCCAT
CAGGCGCAGC AGCTCAAGCT TGCTGCGCTG GGCCGCCTGA CCGCAGGCAT CGCCCACGAA
ATACGCAACC CGTTGGGTGC GGTCAGCCAT GCTGCGCAGT TACTCAACGA GTCGGAAGAC
CTCAGCGCGC CGGATCGCCG TCTGGGGCAG ATCATTCATG ATCAGTCGCA GCGCATTGAT
CGGGTGATTG AAAACGTCCT GCAATTGTCT CGCCGACGCG AAGCACAACC CGAACTGCTC
GACCTGAAAG TCTGGCTGGA AAATTTTGTC AGCGACTTTC GTAGCTCGGC CGCTGCGGAT
CAGTCGATTC ATGTGCAAAT AAGCTCAGGC ATGCTGACCA CTCGCATGGA CGCCGGGCAA
CTGACCCAGA TCATCACCAA CCTGGTGCAG AACGGCCTAC GCTACAGCCG CCGCAATCAC
CCGTCGGCGC AGGTCTGGCT GAACCTGCAC CATGACCGGG AAAGCGATTT ACCCATCCTG
GAAGTGCTGG ACGACGGGCC GGGTGTCAGC GAACAACACC TGAGCAAGAT TTTCGAACCG
TTTTTCACCA CGGAAAGCAA AGGCACCGGC CTGGGTCTAT ACCTTTCCCG TGAATTGTGC
GAAAGCAATC AGGCGCATCT GGAATATATC CCCCGACCAC ACGACGGTGG CAGCTGTTTG
CGCATCACCT TCGCCCACCC GTTCAAAACG AGCTGA
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| Protein sequence | MTAETPSLTS PQAQRILRLY HLYRLTIGVV LVLLISSSLE TELLQLANPN LFRSGCWLYL
VFNILVVVLL ERPSRQAQLF GLAMTDAIML SGLFYAAGGP SSGIGNLLIA SVAISNVLLR
GRIGLLIAAV SAIGIIYLTF YISFGTPSVS NDYVQAGSLG ALCFAAALLV QALTARLQVS
EGLAEQRAAD VDSLEELNAL ILQRMRTGIV VLDARRQVVL ANQGALTLLG HERLVGQVID
AYSPQLVERL RQWLINPIMV PRSITTSSIG PVLQPSFAAL NRGDQRQTLI FLEDLSQIAH
QAQQLKLAAL GRLTAGIAHE IRNPLGAVSH AAQLLNESED LSAPDRRLGQ IIHDQSQRID
RVIENVLQLS RRREAQPELL DLKVWLENFV SDFRSSAAAD QSIHVQISSG MLTTRMDAGQ
LTQIITNLVQ NGLRYSRRNH PSAQVWLNLH HDRESDLPIL EVLDDGPGVS EQHLSKIFEP
FFTTESKGTG LGLYLSRELC ESNQAHLEYI PRPHDGGSCL RITFAHPFKT S
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