| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0820 |
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| Symbol | |
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| ID | 1182445 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 884192 |
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| End bp | 887302 |
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| Gene Length | 3111 bp |
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| Protein Length | 1036 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637392200 |
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| Product | AcrB/AcrD/AcrF family protein |
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| Protein accession | NP_790667 |
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| Protein GI | 28868048 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAAG GTCGTTTCAA CCTGTCAGTG CTGGCCGTGC GCGAGCGCTC GATCACCCTG
TTCCTGATTT GCCTGATTTC GCTGGCCGGG GTCATTGCCT TTTTCAAACT GGGCCGCGCC
GAAGACCCGG CCTTCACGGT CAAGGTAATG ACCGTGGTGT CGGTCTGGCC GGGCGCAACC
GCCCAGGAGA TGCAGGATCA GGTGGCGGAG AAGATCGAAA AGCGCCTTCA GGAACTGCGC
TGGTACGACC GCACCGAAAC CTACACGCGG CCTGGCATGG CATTCACAAC CCTGACCCTG
CTCGACAGCA CGCCGCCGTC GCAAGTGCCG GATGAGTTTT ATCAGGCACG CAAGAAAATC
GGTGACGAGG CCATGACGCT TCCGGCCGGG GTGATCGGGC CGATGGTCAA CGACGAGTAT
TCGGACGTTA CTTTCGCGCT GTTCGCGCTC AAGGCCAAAG GCGAGCCGCA GCGCGTGCTG
GCACGTGACG CCGAATCGCT GCGCCAGCGC CTGCTGCATG TGCCGGGCGT GAAGAAGGTC
AACATCGTGG GCGAGCAGCC CGAGCGCATC TACGTCGAGT TCTCCCACGA GCGACTGGCA
ACGCTGGGTA TCAGCCCGCA AGAGGTATTT GCCGCGCTGA ATAATCAGAA TGCGCTTACC
CCGGCAGGCT CGGTCGAAAC CCGTGGGCCG CAGGTGTTCA TTCGGCTCGA CGGCGCTTTC
GATGAGCTGC AGAAGATCCG CGATACGCCG GTTGTGGCTC AGGGCCGCAC GCTGAAGCTG
GCGGACATTG CCACGGTCAA ACGCGGTTAC GAAGACCCGG CAACGTTCAT GATTCGCAAC
GGCGGCGAGC CGGCACTGTT GCTGGGGATC GTCATGCGCG ATGGCTGGAA CGGGCTGGAC
CTTGGAAAGG CGCTGGATCA TGAGGTGGGC GCGATCAACG CCGAGCTGCC CTTGGGCATG
AGCCTGAACA AGGTCACGGA CCAGGCCGTC AACATCAGTT CGGCGGTCGA TGAGTTCATG
ATCAAGTTTT TCGTCGCATT GCTGGTGGTC ATGCTGGTCT GCTTTATCAG CATGGGCTGG
CGTGTGGGCG TTGTGGTGGC TGCCGCCGTA CCGCTGACCC TGGCGGTGGT CTTCGTGATC
ATGGCCATGA GCGGCAAGAA TTTCGACCGC ATTACATTGG GTTCACTGAT TCTGGCGCTC
GGGCTGCTGG TCGACGACGC GATCATCGCC ATCGAAATGA TGGTGGTGAA GATGGAAGAA
GGTTACGACC GCATCGCGGC CTCTGCGTAC GCCTGGAGCC ACACCGCCGC GCCCATGTTA
TCCGGCACCC TGGTCACCGC TGTCGGCTTC ATGCCCAACG GTTTTGCGCG CTCCACGGCA
GGCGAATACA CCAGCAACAT GTTCTGGATC GTCGGTATCG CGCTGATTGC CTCATGGGTG
GTCGCGGTGT TTTTCACACC GTATCTGGGC GTGAAACTGT TGCCTGAGGT GAAGCAGGTC
GAAGGCGGAC ATGCAACGCT TTACGACACC CCACGCTACA ACCGTTTCCG CCGGGTTCTG
GCACGCGTCA TTGCAGGCAA GTGGCTGGTC GCAGGTTCGG TCATCGGGTT GTTCGTCCTG
GCAGTGCTGG GCATGGGGCT GGTCAAGAAA CAGTTTTTTC CGGTGTCCGA CCGCCCAGAG
GTGCTGGTCG AACTGCAGAT GCCTTACGGC ACCTCGATTG CTCAAACCAG CGCGGCCGCG
GCCAAAGTGG AAAGCTGGCT GGCCGAGCAG GCAGAAGCCG GGATCGTCAC CGCCTACATT
GGCCAGGGCG CGCCACGTTT CTACATGGCG ATGGGGCCGG AATTACCTGA CCCGTCATTT
GCCAAGATCG TGGTGCGCAC CGACAGCCAG GAACAGCGCG AGACACTGAA ACACCGCTTG
CGTCAGGCTA TTTCCGAAGG GCTGGCTGGC GAGGCGCAAG TGCGCGTCAC GCAACTGGTC
TTCGGCCCGT ATTCACCCTA CCCGGTCGCC TACCGCGTTA CTGGCCATGA CCCGGACACA
CTGCGCAGCA TTGCGGCGCA GGTGCAACAG GTGCTGAGCG CCAGCCCGAT GATGCGCACC
GTCAATACTG ACTGGGGCAC GCGCACCCCA ACGCTGCATT TCACCTTGCA ACAGGACCGG
ATGCAGGCCA TCGGGTTGAG TTCCAGCCAG GTCGCGCAAC AATTGCAGTT CCTGCTGACC
GGCCTGCCGG TTACGGCGGT GCGCGAGGAC ATTCGCACCG TGCAGGTGGT TGCCCGCTCG
GCTGGCGACA CCCGACTGGA TCCGGCAAAA ATCATGGACT TCACCCTCAC AGGCGTCGAT
GGGCAACGTG TTCCGCTGTC GCAGATCGGT GCAGTCGATG TGCGCATGGA AGAGCCGGTC
ATGCGCCGGC GCGACCGCAC GCCAACCATC ACCGTACGGG GCGACATCGC CGACGGCCTG
CAACCGCCAG ATGTATCGAC GGCCATTACC CGGCAGTTGC AGCCCATCAT CGACACGCTG
CCCAGTGGCT ATCGGATCGA TCAGGCAGGT TCAATCGAGG AATCCGGCAA GGCAATGGCG
GCGATGTTGC CACTGTTCCC GATCATGCTG GCGGTCACGC TGATCATCCT GATTCTGCAG
GTGCGTTCGA TATCGGCCAT GGTCATGGTG TTTCTGACCA GCCCGCTGGG GCTGATCGGT
GTGGTGCCTA CGCTGATCCT CTTTCAGCAG CCCTTCGGCA TCAATGCACT GGTCGGGCTG
ATCGCACTGT CCGGCATTCT GATGCGCAAC ACGCTGATCC TGATCGGCCA GATCCACCAC
AATGAACAGG CGGGGCTCGA CCCGTTTCAG GCCGTGGTCG AAGCCACCGT ACAACGTGCG
CGCCCGGTGA TACTGACAGC GCTGGCCGCC ATTCTGGCGT TTATCCCCCT CACCCATTCG
GTGTTCTGGG GCACGCTGGC CTACACGCTG ATCGGCGGCA CATTCGCCGG TACGGTGCTG
ACCCTGGTGT TTCTGCCGGC AATGTACTCG ATCTGGTTCA GGATCAGGCC CGATGGCAAC
GAGCGGCCGC AAGGCGGTCA TTCCTTGTCC ACAGGTAAAG GGGTGAGCTA G
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| Protein sequence | MSEGRFNLSV LAVRERSITL FLICLISLAG VIAFFKLGRA EDPAFTVKVM TVVSVWPGAT
AQEMQDQVAE KIEKRLQELR WYDRTETYTR PGMAFTTLTL LDSTPPSQVP DEFYQARKKI
GDEAMTLPAG VIGPMVNDEY SDVTFALFAL KAKGEPQRVL ARDAESLRQR LLHVPGVKKV
NIVGEQPERI YVEFSHERLA TLGISPQEVF AALNNQNALT PAGSVETRGP QVFIRLDGAF
DELQKIRDTP VVAQGRTLKL ADIATVKRGY EDPATFMIRN GGEPALLLGI VMRDGWNGLD
LGKALDHEVG AINAELPLGM SLNKVTDQAV NISSAVDEFM IKFFVALLVV MLVCFISMGW
RVGVVVAAAV PLTLAVVFVI MAMSGKNFDR ITLGSLILAL GLLVDDAIIA IEMMVVKMEE
GYDRIAASAY AWSHTAAPML SGTLVTAVGF MPNGFARSTA GEYTSNMFWI VGIALIASWV
VAVFFTPYLG VKLLPEVKQV EGGHATLYDT PRYNRFRRVL ARVIAGKWLV AGSVIGLFVL
AVLGMGLVKK QFFPVSDRPE VLVELQMPYG TSIAQTSAAA AKVESWLAEQ AEAGIVTAYI
GQGAPRFYMA MGPELPDPSF AKIVVRTDSQ EQRETLKHRL RQAISEGLAG EAQVRVTQLV
FGPYSPYPVA YRVTGHDPDT LRSIAAQVQQ VLSASPMMRT VNTDWGTRTP TLHFTLQQDR
MQAIGLSSSQ VAQQLQFLLT GLPVTAVRED IRTVQVVARS AGDTRLDPAK IMDFTLTGVD
GQRVPLSQIG AVDVRMEEPV MRRRDRTPTI TVRGDIADGL QPPDVSTAIT RQLQPIIDTL
PSGYRIDQAG SIEESGKAMA AMLPLFPIML AVTLIILILQ VRSISAMVMV FLTSPLGLIG
VVPTLILFQQ PFGINALVGL IALSGILMRN TLILIGQIHH NEQAGLDPFQ AVVEATVQRA
RPVILTALAA ILAFIPLTHS VFWGTLAYTL IGGTFAGTVL TLVFLPAMYS IWFRIRPDGN
ERPQGGHSLS TGKGVS
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