Gene PSPTO_0819 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0819 
Symbol 
ID1182444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp883449 
End bp884195 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content58% 
IMG OID637392199 
Producthypothetical protein 
Protein accessionNP_790666 
Protein GI28868047 
COG category[R] General function prediction only 
COG ID[COG2085] Predicted dinucleotide-binding enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATCG GAATTATCGG CACGGGCTCA ATCGGCGCGA GCTTGGCCCG TAAACTGGCC 
GCCAGTGGCC ATGAAATCAA ATTGGCCAAC TCCAGAGGCC CCGACTCCAT TGGCGATCTT
GCCCGCGATG TGGGTGCCAG TGCGGTCAGT AAGGAAGAGG CGGTCAACGG CGTTGATGTG
GTGATTACAT CGATCCCGTT CGCAAACTAT CCGGACCTGG CTAACCTGTT CAGCCAGGTG
CCTGCGCATG TTGTGGTTAT CGACACGTCC AATTACTACC CCATCCGCGA CGGCGTGATA
GAGGGTATTG ACGATGGCCA GCCCGAAAGC GTGTGGGTCA GTAAACAGAT CGGCCGCCCT
GTGGTTAAAG CCTGGAATGC TTTGCTGGCC GAGACGCTTG CCAGCAAGGG CTTGCCAATC
GGTTCGCCTT TGCGACTGGC CCTTCCGGTT GCTGGCGATA ATGACGAAGC CAAGGCGGTA
GCGCTGAAGC TGGTCGATGC AACGGGCTTT GATGCCGTGG ACTCGGGCAG TTTATCCGAC
TCATGGCGTC AGCAGCCGGG CACTCCGGCT TATTGCACCG AATTGCTGGT TGGTGAGCTG
GAGCGCGCAT TGGCCGCTGC TGATAAAACT CAAGCCGCGC AGCATCGTGA AACTGTGCTG
AAAGCGCTCA TGTCTGCACC CGAGCCCCTG AGCCACACTC AGACCGTTGC CTTGAATCGT
GCAGTCACCG GAACGGTCTT GCACTAG
 
Protein sequence
MKIGIIGTGS IGASLARKLA ASGHEIKLAN SRGPDSIGDL ARDVGASAVS KEEAVNGVDV 
VITSIPFANY PDLANLFSQV PAHVVVIDTS NYYPIRDGVI EGIDDGQPES VWVSKQIGRP
VVKAWNALLA ETLASKGLPI GSPLRLALPV AGDNDEAKAV ALKLVDATGF DAVDSGSLSD
SWRQQPGTPA YCTELLVGEL ERALAAADKT QAAQHRETVL KALMSAPEPL SHTQTVALNR
AVTGTVLH