| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0809 |
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| Symbol | ispH |
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| ID | 1182434 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 874305 |
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| End bp | 875252 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637392189 |
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| Product | hydroxymethylbutenyl pyrophosphate reductase |
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| Protein accession | NP_790656 |
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| Protein GI | 28868037 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAATCA AACTCGCCAA CCCCCGCGGC TTTTGTGCCG GAGTGGACCG CGCGATCGAA
ATCGTCAATC GTGCTCTGGA AGTGTTTGGT CCGCCGATTT ATGTGCGCCA TGAAGTTGTT
CACAACAAAT TTGTCGTCGA AGACCTGCGC TCTCGTGGCG CGATCTTTGT TGAAGAGCTT
GAACAGGTGC CGGACGACGT CATCGTCATC TTCAGTGCCC ACGGTGTTTC CCAGGCCGTG
CGCACCGAAG CTGCCGGTCG TGGCCTGAAA GTCTTCGATG CCACCTGTCC GCTGGTGACC
AAGGTGCACA TCGAAGTCGC CCGCTACAGC CGCGATGGTC GCGAGTGCAT CCTGATCGGC
CACGCCGGTC ACCCGGAAGT CGAAGGCACC ATGGGCCAGT ACGACGCCGT CAATGGCGGG
GCGATCTATC TGGTCGAAGA TGAAGCGGAC GTTGCCAGCC TTGAGGTGCG TAATCCCGAG
TCGCTGGCGT TCGTGACCCA GACCACCTTG TCGATGGACG ACACCAGTCG GGTGATCGAC
GCGTTGCGCA AGCGCTTCCC GGCCATCGGC GGGCCACGCA AGGACGACAT CTGCTACGCC
ACGCAAAACC GCCAGGACGC GGTCAAGCAA TTGGCCGACG AGTGCGACGT GGTGTTGGTG
GTGGGCAGCC CGAACAGCTC CAACTCCAAC CGCCTGCGCG AGCTGGCCGA GCGCATGGCC
ACCCCGGCCT ATCTGATTGA TGGCGCCGAA GACATGCAGA AGGGCTGGTT CGATGGCGTC
GAGCGTATCG GCATCACCGC TGGCGCATCG GCCCCGGAAG TGCTGGTGCG CGGCGTGATC
CAGCAATTGC AGGCCTGGGG CGCAACCGGC GCGGATGAGT TGGCTGGCCG CGAAGAGAAC
ATCACGTTCT CCATGCCTAA AGAGCTGCGG GTCAAGTCGC TGCTCTAG
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| Protein sequence | MQIKLANPRG FCAGVDRAIE IVNRALEVFG PPIYVRHEVV HNKFVVEDLR SRGAIFVEEL
EQVPDDVIVI FSAHGVSQAV RTEAAGRGLK VFDATCPLVT KVHIEVARYS RDGRECILIG
HAGHPEVEGT MGQYDAVNGG AIYLVEDEAD VASLEVRNPE SLAFVTQTTL SMDDTSRVID
ALRKRFPAIG GPRKDDICYA TQNRQDAVKQ LADECDVVLV VGSPNSSNSN RLRELAERMA
TPAYLIDGAE DMQKGWFDGV ERIGITAGAS APEVLVRGVI QQLQAWGATG ADELAGREEN
ITFSMPKELR VKSLL
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