Gene PSPTO_0807 details

Gene Information

• Locus tag: PSPTO_0807
• Symbol: lspA
• ID: 1182432
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: +
• Start bp: 873231
• End bp: 873752
• Gene Length: 522 bp
• Protein Length: 173 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 637392187
• Product: lipoprotein signal peptidase
• Protein accession: NP_790654
• Protein GI: 28868035
• COG category: [M] Cell wall/membrane/envelope biogenesis; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG0597] Lipoprotein signal peptidase
• TIGRFAM ID: [TIGR00077] lipoprotein signal peptidase

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCTGACG CCACTTTGTC TAATACCTCG CTCGGCCGCC TGGCCTGGCT GTGGTTGACC 
GTACTGATTG TGGCTGTAGA TCAGGTCAGC AAGTACTACT TCGAGAACGC GCTGAGCCTT 
TATCAGCAGA TCATTGTGAT CCCGGACTAC TTCAGCTGGA CACTGGCCTA CAACACGGGC 
GCCGCCTTCA GTTTTCTGGC GGACGGTGCC GGTTGGCAGC GCTGGCTGTT TGCCCTGATC 
GCGGTCGTGG TCAGTGCGGT GCTGGTGGTC TGGCTCAAGC GTCTGGGTCG CGATGATACC 
TGGCTGGCCA TTGCGCTGGC GCTGGTACTG GGCGGCGCGC TGGGCAACCT GTATGACCGC 
GTGGTGTTAG GGCATGTGAT CGACTTCATT CTGGTGCATT GGCAAAACCG CTGGTATTTC 
CCGGCGTTCA ACGTCGCGGA CAGCGCAATC ACCGTCGGCG CAATCATGTT GGCGCTGGAC 
ATGTTCAAGA GCAAGAAAAC CGGAGAAACC GTCAATGACT GA 

 

Protein sequence

MPDATLSNTS LGRLAWLWLT VLIVAVDQVS KYYFENALSL YQQIIVIPDY FSWTLAYNTG 
AAFSFLADGA GWQRWLFALI AVVVSAVLVV WLKRLGRDDT WLAIALALVL GGALGNLYDR 
VVLGHVIDFI LVHWQNRWYF PAFNVADSAI TVGAIMLALD MFKSKKTGET VND