Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0797 |
Symbol | rplU |
ID | 1182422 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 863291 |
End bp | 863602 |
Gene Length | 312 bp |
Protein Length | 103 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637392177 |
Product | ribosomal protein L21 |
Protein accession | NP_790644 |
Protein GI | 28868025 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0261] Ribosomal protein L21 |
TIGRFAM ID | [TIGR00061] ribosomal protein L21 |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTACGCAG TAATTGTTAC CGGTGGCAAG CAGTACAAAG TCGCCCCAGG TGAATACCTG AAAATTGAAA AACTGGAAAT CGCTACTGGC GAATCCGTCA CTTTCGACCG CGTTCTGCTG GTTGGCAATG GCGACGACGT CAACATCGGT GCTCCAGTTG TTGCTGGCGC TACCGTTGTA GCTGAAGTGA TCTCGCAAGG TCGCCACGAC AAGGTTCGTA TCATCAAGTT CCGTCGTCGT AAGCACCACA TGAAGCGCAT GGGCCACCGC CAGTGGTACA CCGAGATCAA AATTACAGGT ATTCAGGCTT AA
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Protein sequence | MYAVIVTGGK QYKVAPGEYL KIEKLEIATG ESVTFDRVLL VGNGDDVNIG APVVAGATVV AEVISQGRHD KVRIIKFRRR KHHMKRMGHR QWYTEIKITG IQA
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