| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0796 |
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| Symbol | ispB |
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| ID | 1182421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 862083 |
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| End bp | 863051 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637392176 |
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| Product | octylprenyl diphosphate synthase |
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| Protein accession | NP_790643 |
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| Protein GI | 28868024 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACCCC AAGCCTTCTA CCGCGCGGTG GCGGACGACT TTAGTGCCGT TGACCTTATC
ATCAAAAAGC AACTGACGTC GCGTGTACCG CTGGTCTCCA AGATCGGTGA TTACATTACG
TCGGCAGGTG GCAAGCGCCT GCGCCCGCTG CTGGTGCTGC TGTGTGGCAA GGCTCTAGGC
CGTGAAGGCG ACGACATCCG CCTGCTGGCC GCCACCATCG AATTCCTGCA CACCGCCACC
CTGCTGCATG ACGACGTTGT CGACATGTCG GGCATGCGTC GCGGCCGCTC CACTGCCAAC
GCCCTGTGGG GCAACGCGCC CAGCGTATTG GTGGGTGACT TCCTTTATTC GCGCTCGTTC
GAAATGATGG TTGAACTGGG CTCGATGGAA GTCATGAAGA TCCTGTCCAA GGCGACCCGC
ATCATTGCCG AAGGCGAAGT GCTGCAGTTG TCCAAGATCC GCGACGCCAG CACCACCGAA
GAAACCTACA TGGAAGTGAT TCGCGGCAAG ACAGCCATGC TGTTCGAGGC CTCGACCCAC
AGCGCCGCAG CCCTGTGCAA GGCCTCCGAA GCGCAGACCG AAGCCCTGCG CACGTTCGGT
GACCATCTGG GTGTGGCCTT CCAGCTGGTC GATGACCTGC TCGACTACCG CGGCGATGCC
GAGACCCTGG GCAAGAACGT CGGTGACGAT CTGGCCGAAG GCAAGCCGAC CCTGCCGCTG
ATCTACACCA TGCGCGAAGG CAGCCCGGAA CAGGCCGCAC TGGTTCGGCA GGCAATCCAG
AAAGGTGGCC TGGAAGATCT GGAAAGCATC CGTAATGCCG TGGAAAGTGC CGGTGCGCTT
GATTACACCG CACAACTGGC CCGCGACTAC GCTGCGCGCG CCATTGCCTG CCTGGACGCC
TTGCCGCCCA GCGAATACCG CGATGCCCTG ATCGAACTCA GCGAGTTCGC CGTCGCCCGT
ACGCACTGA
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| Protein sequence | MQPQAFYRAV ADDFSAVDLI IKKQLTSRVP LVSKIGDYIT SAGGKRLRPL LVLLCGKALG
REGDDIRLLA ATIEFLHTAT LLHDDVVDMS GMRRGRSTAN ALWGNAPSVL VGDFLYSRSF
EMMVELGSME VMKILSKATR IIAEGEVLQL SKIRDASTTE ETYMEVIRGK TAMLFEASTH
SAAALCKASE AQTEALRTFG DHLGVAFQLV DDLLDYRGDA ETLGKNVGDD LAEGKPTLPL
IYTMREGSPE QAALVRQAIQ KGGLEDLESI RNAVESAGAL DYTAQLARDY AARAIACLDA
LPPSEYRDAL IELSEFAVAR TH
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