| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0778 |
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| Symbol | recD |
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| ID | 1182403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 840139 |
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| End bp | 842232 |
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| Gene Length | 2094 bp |
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| Protein Length | 697 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637392158 |
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| Product | exodeoxyribonuclease V, alpha subunit |
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| Protein accession | NP_790625 |
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| Protein GI | 28868006 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | [TIGR01447] exodeoxyribonuclease V, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCGTT CGTTCGACGA TCTGTTGCCC ACTGCGCTGG ACGACATCAG CCTCGCCGAC
TTGAGCCCGT TGACCCGCGC CGACGATCTG CTGATGCTGC TGGAACGCTG GGTCGAGCGC
GGTTGGTTGC GCGCCCTGGA CCGGGCTTTT GTCGCGTTCC TCAGCGACCT CGACCCGCAG
GCCGATCCAC TGGTGCTGGT CGCTGCGGCC CTCACCAGCC ATCAACTGGG CCACGGCCAT
GTCTGCCTCG ATCTTTACGA GACCTTGAAA GAGCCGGACT TCGCCTTGTC ACTGCCGCCC
GAAGGTGATC AGCAAGACGG GGCAATGCTG CTGCCCTCGC AATTGCTGGC AGCGCTGGAT
GGCGCAGCGT GGTGCCAGGC GCTGGCGCGC AGCATGCTGG TCGCGCAAGC CACAGACTCA
AGCGCCGAGG CGCTGCAAAA ACCCTTAGTG CTGGCAGAAC GACGTTTGTA CCTGCGCCGC
TACTGGACCT ACGAACGCCG CATCGCTGCA GCCCTGCGTC GGCGTCTGGA GCAAGCCGAT
GCTCCGCCCG ACGATCTGCC GCAGCGCCTG AACGCTTTGT TCGGGCCTGC GAACTCAGCG
CCGGACGCCA TCATCGACTG GCAGAAACTG GCCTGCGCAC TGGCAACCCG CCGGGCATTC
AGCATCATCA CCGGCGGCCC CGGCACGGGC AAAACCACCA CCGTGGTGCG CTTGCTGGCG
TTGCTTCAGG CTCCTGCCGT GCAGAGCGGC CAGCCGCTGC GCATTCGTTT GGCAGCGCCG
ACCGGCAAGG CGGCAGCACG TCTGACCGAA TCCATCAGCC AGCAAGTGCA AAGCCTGGAC
GTCAGCGCCG AGGTGCGGCA GAAAATCCCC AGTGAAGTCA CCACCGTGCA CCGCTTGCTG
GGCAGCCGCC CTGGCACGCG CCATTTCCGT CACCACGCAG GTAACTTGCT GCCACTGGAC
GTGCTGGTCG TCGACGAAGC GTCCATGATC GACCTGGAAA TGATGGCCAA CCTGCTCGAC
GCACTGCCGC CGCACGCGCG CATGGTTCTG CTCGGCGACA AAGACCAATT GGCTTCCGTC
GAGGCGGGCG CGGTACTGGG TGATTTGTGT CGCGACGCCG AAGACGGCTT CTACAGCCCG
CAAACCCAGA CCTGGCTCGA AGCTGTCAGC GGCGAAGACC TCAGCAAAGG CACATTGCGC
CAAGGCGATG CGCAGCAACA TCCACTGGCC CAACAAGTGG TCATGCTGCG CCACTCGCGC
CGTTTTGGCC AAGGCAGCGG CATCGGCCAG TTGGCCCGGC TGGTCAACCA GCAACAGGAT
CAACAGGCGA GGGCGCTGCT GTCGGCAGGC AGTCACACCG ATCTGTTCGC CCTGGCGCTC
AAGGGCGAGC AAGACCTCAA GTTCGAGCGG CTGGTGCTGG AAGGCCTTGG CCAAGGCGAG
CAAGGCCCGC AGGGTTATAG GCATTACCTG AACGTGCTCG GCGCCGAGCG CCCGGCAGTC
GGCGCTGAAC TGGACGATGA ATGTTGGACC CGATGGGCAC GCTCGGTACT CGACGCCTTC
GACTCGTTCC AGTTGCTCTG CGCTGTACGC AAAGGCCCGT GGGGCGTAGA AGGCCTTAAC
CAACGCATCA CCCATGCGTT ATTCAATGCG CAGCTGATCG AAAGCGATCA GCAGTGGTAC
GAAGGCCGGC CAGTCCTGAT GACCCACAAC GACTACGGCC TGGGCTTGAT GAACGGCGAC
ATCGGCATCA CCTTGCGATT GCCCGAGCGC GATGGCGAGG GCAAACAGGT CCTGCGCGTC
GCCTTCCCGC GCAACGATGG CAGCGGCGGC GTGCGCTTCG TCCTGCCCAG CCGCCTCAAC
GAAGTCGAAA CCGTCTACGC CATGACCGTG CATAAATCCC AAGGCTCGGA ATTCGCCCAC
ACCGCCCTGA TTCTGCCCGA AGCCCTCAAC CCGGTACTGA CCAAAGAACT CATCTACACC
GGCATCACCC GCGCCAAACA CTGGTTCAGC CTGATCGAAC CGCGCCAGGG CATCTTCGAG
GAAGCCCTGC GCCGCAAAGT CAAACGCCTG AGCGGCTTGA TGCTCGGGCT TTGA
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| Protein sequence | MSRSFDDLLP TALDDISLAD LSPLTRADDL LMLLERWVER GWLRALDRAF VAFLSDLDPQ
ADPLVLVAAA LTSHQLGHGH VCLDLYETLK EPDFALSLPP EGDQQDGAML LPSQLLAALD
GAAWCQALAR SMLVAQATDS SAEALQKPLV LAERRLYLRR YWTYERRIAA ALRRRLEQAD
APPDDLPQRL NALFGPANSA PDAIIDWQKL ACALATRRAF SIITGGPGTG KTTTVVRLLA
LLQAPAVQSG QPLRIRLAAP TGKAAARLTE SISQQVQSLD VSAEVRQKIP SEVTTVHRLL
GSRPGTRHFR HHAGNLLPLD VLVVDEASMI DLEMMANLLD ALPPHARMVL LGDKDQLASV
EAGAVLGDLC RDAEDGFYSP QTQTWLEAVS GEDLSKGTLR QGDAQQHPLA QQVVMLRHSR
RFGQGSGIGQ LARLVNQQQD QQARALLSAG SHTDLFALAL KGEQDLKFER LVLEGLGQGE
QGPQGYRHYL NVLGAERPAV GAELDDECWT RWARSVLDAF DSFQLLCAVR KGPWGVEGLN
QRITHALFNA QLIESDQQWY EGRPVLMTHN DYGLGLMNGD IGITLRLPER DGEGKQVLRV
AFPRNDGSGG VRFVLPSRLN EVETVYAMTV HKSQGSEFAH TALILPEALN PVLTKELIYT
GITRAKHWFS LIEPRQGIFE EALRRKVKRL SGLMLGL
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