| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0777 |
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| Symbol | recB |
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| ID | 1182402 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 836450 |
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| End bp | 840142 |
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| Gene Length | 3693 bp |
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| Protein Length | 1230 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637392157 |
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| Product | exodeoxyribonuclease V, beta subunit |
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| Protein accession | NP_790624 |
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| Protein GI | 28868005 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
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| TIGRFAM ID | [TIGR00609] exodeoxyribonuclease V, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAATC AATCGCTCCC TCTGGCGCTA CGCTTTCCGT TACGTGGCAG CCAACTGATC
GAAGCCAGCG CCGGGACCGG CAAGACCTTC ACCATCTCTG CGCTGTACCT GCGCCTGGTG
CTCGGCCACG GCTCCGAACA GTCAGGTTTT GGCCGCGAAT TGCTGCCGCC GCAGATCCTC
GTCGTGACCT TCACCGACGC TGCCACCAAA GAGCTGCGCG ACCGGATTCG TACCCGGCTG
GCCGAAGCTG CGCGGTTCTT TCGTGACGAA ATTTGTGCCC CCGATGAACT GATCAGCCAA
TTGCGCGAGC AGTTCGAGGC CGAGCAGTGG CCTGCCTGTG CCAGCCGTCT GGACATCGCC
GCGCAATGGA TGGACGAAGC CGCCGTCTCG ACCATCCACA GCTGGTGCCA GCGCATGTTG
CGCGAGCATG CTTTCGACAG CGGCAGCCTG TTCACCCAGA CCCTCGAAAC CGATCACAGT
GACCTGCTCG GCGAAGTCCT GCGCGATTAC TGGCGGCGAT TCTGCTACCC CATGAGCGGT
GACGCGCTGG CCTGGGTGCG GGAAAACTGG AGCGGTCCGG CGGCACTGTT GCCCCGCGTA
CGTGGCTTGT TTGGCCATGA CCGCAGCACC AACACCCAAG CGCCGGCCGA GCTCATCGAG
GCGTCGTTGC TGGAGCGTCG GGCAGCGCTT GCCGCCCTGA AAGCCCCTTG GGCCGTATGG
TCTGACGAGC TCTACACGCT CTGCCAGGAC GCCGTGGCCC GCAAGGTGGT CGATGGCCGC
AAGATGCAGG AGCGATTCTT CAAACCCTGG TTTGAAAAGC TCGCCGCGTG GGCCGCTGAC
GAAACTCAGG AAGCGCTGGA CCTGGGCACC GGCTTCACAC GCTTGACCCC AGACGGCGTC
GCCGAGGCCT GGAAAAGTGA TCCACCGTCG CACCCGGCGT TTGCAGCAAT GGCGCAACTG
AAAGCAGCGC TCGACGGTCT GCCCAAGCCA GATGCGGCCG TGCTGCAACA TGCCGCGCAG
TGGGTCAGTG CGCGTTTTGA AGAAGAGAAG CGCCGCCGTG CCGAAATGGG TTTTGACGAC
ATGCTGCTCA GGCTCGACGG CGCATTGCAC GGCGCTGGCG GCGAGCGGCT GGCGACGCTG
ATTCGCGAGC AGTTTCCGGT GGCGCTGATC GATGAGTTTC AGGACACCGA TCCGGTGCAG
TACCGGATCT TCGACAGCAT CTATCGTCTG GAAGGCAACG ATGAGCAAAC CGGCTTATTT
CTAATCGGCG ACCCCAAGCA AGCCATTTAC GCCTTCCGTG GCGCCGACAT CTACACCTAC
CTGCGCGCCC GGCAGGCCAC CGATGGTCGC TGGCACACGC TGGACACCAA CTATCGCTCC
AGCCACGCGA TGGTCGAGTC GGTCAACCAT GTCTTCACGC GAGCAGAGCA ACGCCCGGAA
GGTAAAGGTG CGTTTCTGTT CCGTGACGAG GAAGGCAATC AGGTGCCGTT CTCCGATGCC
TTGGCCCAAG GTCGCAAGGA AACTCTGGAA GTCGATGGCG CCGCGCTCAC CGCATTGACC
GTATGGCATC TTGAGAGCGA GCAGCCGGTG TCCGGTGTCG TCTATCGCCA GCAGCTTGCA
AGCCGCTGCG CCAGCGAGAT CGTGCGCCTG CTCAACGCCG GTCAGCAGGG CCGCGCGGGC
TTCACTGCAC CGGGCAATGC CCAGCGTGGG CTGCGCCCGG CCGACATCGC GATTCTGGTT
CGCGACGGCA AAGAGGCGCA GGCGGTGCGC TCTCAACTGA CGGCGCGTGG CGTGCGCAGC
GTGTACCTGT CGGACAAGGA TTCAGTGTTC GCCGCGCAGG AGGCGCACGA CCTGCTGTCC
TGGCTCAAAG CCTGCGCCGA GCCGGATTCC GAACGTACGC TGCGCGCGGC ACTGGCCTGT
ATTACCCTCG ACCTGCCGCT TGCCGAACTG GAACGCTTGA ATCAGGACGA ACTGGCGTGG
GAACAGCGTG TGATGCAGTT CCGTGGCTAT CGCGCTGTAT GGCGCAGTCA GGGCGTGCTG
CCGATGCTGC GTCGCCTGCT GCATGACTTT GCCCTGCCGC AAACCTTGAT GACCCGCACC
GACGGCGAGC GAGTGCTGAC CAATCTGCTG CACCTGTCCG AACTGCTGCA ACAGGCCGCC
GCCGAGCTGG ATGGCGAACA GGCGTTGATT CGTCATCTGG GCGATCACCT GGCGCTGTCC
GGGCAGGCCG GAGAAGAACA GATCCTGCGC CTGGAAAGCG ACGAGCAACT GGTCAAAGTC
GTCACCATTC ACAAGTCCAA GGGGCTGCAA TACCCGCTGG TGTTCCTGCC GTTCATCTGC
TCGTCCAAAC CGGTCGACGG CAGCCGCCTG CCACTGCAGT TTCATGATGC CGATGGCCGC
GCGCAGATCA GTCTGCAGCC CACCGAGGCG CTGATTCAGC AAGCCGATGA CGAGCGCCTG
GCAGAAGACC TGCGCTTGCT TTATGTCGCG CTGACCCGTT CGGAGCATGC CTGCTGGCTA
GGCGTTGCCG ACCTCAAACG CGGCAATGCC AACAGCTCGA TGTTGCACCG CTCGGCGCTG
GGCTATTTGC TGGGTGGCGG TACGGCGCTG CCCGAGTCGG CTGACCTCAA GGTCTGGCTG
CGTGATCTGG CCGAGGGTTG CAGCGCGATT GCTTTGCAGC CGGTTCCCGA ACCCACCGAT
GACAGCTTTA GTGCGCCGCG TAACGAGGCC TCGCTGGTCA AACTGCTGGT ACCCAAACGC
CGTGCTGCCG AGAATTGGTG GATCGCCTCC TACAGCGCGC TGCGTATTGG CGACACGGTA
ACGGCAGGTG CCGACGAGTC ACCTGACAGC CCGCAGGCAC AAAAGCTGTT TGACGACGAG
CGCCTTGATC CCGAAGCGCC TCGCGACATA CTGGTCAGCG GCGGCGATAT CCACCGCTTC
CCGCGTGGCC CGAACCCCGG CACCTTTCTG CACGGGTTGC TGGAATGGGC AGGCAACGAG
GGGTTTGCGA ACACGGCGCA TGATTCGGTC CAACTGCAAG ACGCCGTGGC GCGTCGTTGT
AATCGACGCG GTTGGGCCGG CTGGATCAAC ACCCTGCGCG ACTGGCTGCA GCATATGCTG
AACATGCCGC TGCGCCTCTC GCCTGATTCC ACGCCGGTTG CATTAGGCGA CCTGAATCAG
CCCAATCAGT ACCGCGTCGA AATGGAGTTC TGGTTCGCCA GCACTAACGT CAACGTGGCG
CAGATGGATA CCCTTGTGCG CCGTTTCACC CACGACAATG CGCCACGGGC CGCCACCGAA
ACCGTCTCGC TCAACGGCAT GTTCAAAGGC TTCATCGACC TGACATTCGA GCACGAAGGC
CGTTACTACG TGGCTGACTA CAAGTCCAAC TGGTTGGGCA GCGATGACGA CGCCTACACC
GATCTGGCGA TGGAAACGGC GATTCTCGAC AACCGCTATG ACCTGCAATA CGTGCTTTAT
CTGCTGGCGC TGCATCGACA GCTCAAGACA CGCATGGCCG ATTATGACTA CGACCAGCAC
ATGGGCGGCG CGCTTTACCT GTTCCTGCGC GGCAGCCGTT CCGCCTCTCA AGGCGCGTAT
TTCACTCGTC CGCCACGCGA ACTGATCGAG AGCCTGGACC TGCTGTTTCA GGGCAAACCC
TTAACGCCTG ACCTGCCTGG AGCATTGGCA TGA
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| Protein sequence | MSNQSLPLAL RFPLRGSQLI EASAGTGKTF TISALYLRLV LGHGSEQSGF GRELLPPQIL
VVTFTDAATK ELRDRIRTRL AEAARFFRDE ICAPDELISQ LREQFEAEQW PACASRLDIA
AQWMDEAAVS TIHSWCQRML REHAFDSGSL FTQTLETDHS DLLGEVLRDY WRRFCYPMSG
DALAWVRENW SGPAALLPRV RGLFGHDRST NTQAPAELIE ASLLERRAAL AALKAPWAVW
SDELYTLCQD AVARKVVDGR KMQERFFKPW FEKLAAWAAD ETQEALDLGT GFTRLTPDGV
AEAWKSDPPS HPAFAAMAQL KAALDGLPKP DAAVLQHAAQ WVSARFEEEK RRRAEMGFDD
MLLRLDGALH GAGGERLATL IREQFPVALI DEFQDTDPVQ YRIFDSIYRL EGNDEQTGLF
LIGDPKQAIY AFRGADIYTY LRARQATDGR WHTLDTNYRS SHAMVESVNH VFTRAEQRPE
GKGAFLFRDE EGNQVPFSDA LAQGRKETLE VDGAALTALT VWHLESEQPV SGVVYRQQLA
SRCASEIVRL LNAGQQGRAG FTAPGNAQRG LRPADIAILV RDGKEAQAVR SQLTARGVRS
VYLSDKDSVF AAQEAHDLLS WLKACAEPDS ERTLRAALAC ITLDLPLAEL ERLNQDELAW
EQRVMQFRGY RAVWRSQGVL PMLRRLLHDF ALPQTLMTRT DGERVLTNLL HLSELLQQAA
AELDGEQALI RHLGDHLALS GQAGEEQILR LESDEQLVKV VTIHKSKGLQ YPLVFLPFIC
SSKPVDGSRL PLQFHDADGR AQISLQPTEA LIQQADDERL AEDLRLLYVA LTRSEHACWL
GVADLKRGNA NSSMLHRSAL GYLLGGGTAL PESADLKVWL RDLAEGCSAI ALQPVPEPTD
DSFSAPRNEA SLVKLLVPKR RAAENWWIAS YSALRIGDTV TAGADESPDS PQAQKLFDDE
RLDPEAPRDI LVSGGDIHRF PRGPNPGTFL HGLLEWAGNE GFANTAHDSV QLQDAVARRC
NRRGWAGWIN TLRDWLQHML NMPLRLSPDS TPVALGDLNQ PNQYRVEMEF WFASTNVNVA
QMDTLVRRFT HDNAPRAATE TVSLNGMFKG FIDLTFEHEG RYYVADYKSN WLGSDDDAYT
DLAMETAILD NRYDLQYVLY LLALHRQLKT RMADYDYDQH MGGALYLFLR GSRSASQGAY
FTRPPRELIE SLDLLFQGKP LTPDLPGALA
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