Gene PSPTO_0776 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0776 
SymbolrecC 
ID1182401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp832977 
End bp836453 
Gene Length3477 bp 
Protein Length1158 aa 
Translation table11 
GC content61% 
IMG OID637392156 
Productexodeoxyribonuclease V, gamma subunit 
Protein accessionNP_790623 
Protein GI28868004 
COG category[L] Replication, recombination and repair 
COG ID[COG1330] Exonuclease V gamma subunit 
TIGRFAM ID[TIGR01450] exodeoxyribonuclease V, gamma subunit 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGTTA CAACCCCGCT GAGTGCAGGT TTCATGGTGG TTCAAGGCAA CCGCCCGGAT 
GAACTGCGCA GTCTGGTTGT GTCCTGGATG CGTCGCTATC CCCTGGCACC GCTTGAGAAC
GAGATTGCGC TGGTGCAGAG CAACGGCATT GCGCAATGGC TCAAACTTGC GCTGGCTGAA
GACGCTCAGG ACGATGACAA CGGCGGCTGC GGCATTGCGG CTGCGATAGA TGTTCAGCTC
CCTGGCAGTT TCATGTGGAC GCTGTATCGC AGGGTCCTCG GCAGCGATGA AATTCCTCAG
ACGTCTCTGC TCGACAAGAC CCCGCTGACC TGGCGCTTGA TGCGCTTGCT TCCCGCACTG
ATCAATCAGC CCCACTTCGA GCCACTGCAG CGCTTTCTGA CCGACGACAC CGACCTGCGC
AAGCGCTATC AATTATCCGA ACGCTTGTCT GATCTGTTCG ACCAATATCA GGTCTATCGC
GCTGACTGGC TGGAAGACTG GGCCGCAGGC CTACACCAAT TGCGCGACGC ACGAGGTCAG
CCACGGCCCT TGTCCACTGC CAATTGCTGG CAGGCCGAGT TATGGCGCGC ACTGCTGGAT
GATGTCGGAG CCAAGGGCAT GGCCCAGAGC CGTGCTGGCG TGCACCGGCG GTTTATCGAG
CGCATTGGCA CCATGACCGA AGCGCCGCCT GGCTTGCCAT CGCGGGTAAT CGTATTCGGC
ATATCGTCAC TCCCGGCGCA GGCGCTGGAA GCACTGGCCG GCTTGGCGAA GTTCAGCCAG
GTGCTGCTCT GTGTGCACAA CCCCTGCCGT CACCACTGGA CCGACATCGT CGCTGACAAG
GACCTGCTGC GTCATCAGTA CAAGCGTCAG GCCCGCAAGA CCGGTATGCC GATGATCCTC
GATCCGCAAG CGCTGCATCA GCATGCGCAT CCGCTGCTCG CTGCCTGGGG AAAGCAGGGC
CGTGATTACA TCAACCTGCT GGACAGCCAT GACGATCCGC GCAGCTATCG TTCGTCATTC
AAGGACGAGC GGATTGACCT GTTCAGTGAG GTCGAGCCAA CCAATCTGCT GAACCAGTTG
CAGGACGATA TTCTCGAACT GCGCCCGCTG GATGAAACGC GGGAGATATG GCCAGCCATT
GACCCGCTTG AAGACCGCTC GCTCCGGTTT CACGTTGCCC ACAGCGCGCA GCGTGAAGTG
GAAGTGCTGC ATGACCAGCT CCTGGCGCGG TTCAGCAAAG ACCCCAACCT GCGCCCGCGT
GATGTGATTG TCATGGTTCC GGACATCGAC AGCTACGCGC CACACATTCG CGCTGTCTTC
GGCCAGATCG AACGCGAAGA TCGCCGTTTT ATTCCCTTCA CGCTGGCCGA TCAGGGGCAA
CGTGGTCGTG AGCCATTGCT GATCGCTGTC GAGCATCTGC TTAAGCTCCC CGACAGCCGC
TTCCCGGTCA GCGAAATTCT CGACCTGCTG GACGTTCCGG CCTTGCGAGC GCGCTTTCGC
ATTCAGGAGC GCGATCTGCC AACCCTGCAT CGCTGGATTG AAGGCGCAGG CATCCGCTGG
GGCCTCAATG CGCAGCAACG CGCCGGTCTG GGGTTGCCGG ATGCGCTGGA ACAGAACAGC
TGGCACTTCG GCCTGCGCCG CATGTTGCTA GGTTACGCTG TGGGTGCCGG TACCGCTTAT
GACGGCATTG AGCCCTACGA CGAGATCGGC GGGCTGGATG CTGCATTGAT AGGCCCGCTG
GTAGCGTTGA TCGATGGGCT GCAGGTTGCC CATACAGAGC TGTCCACGCC CGCCACCCCG
GAGCAATGGG GCGCACGCTT GCAAGCCATT CTCCAGCTGT TCTTCATTGC TGAAAGCGAG
CATGACGACT ACCTGCTTGC TCAGCTCGAA ACACTGCGTG AAAACTGGCT GGAAACCTGT
GCAGCGGTAA ACCTGATTGA TGAGCTGCCG CTGACCGTGG TCCGTGAGGC CTGGCTTGCC
GGGCTTGATC AGGGCCGCTT GTCTCAGCGT TTTCTGGCAG GCTCGGTCAA CTTCTGCACG
TTGATGCCCA TGCGCGCCAT CCCGTTCAAA GTGGTCTGCC TGTTGGGCAT GAACGATGGC
GATTACCCGC GCGCGCAACC CCCGCTGGAC TTCGACCTGA TGGGCAGTGA TTACCGCCCC
GGTGACCGTT CGCGTCGTGA AGATGACCGT TATCTGTTGC TCGAAGCCGT GCTCTCGGCG
CGGGATCAAC TGTACGTCAG CTGGGTTGGC CGCAGCATTC GTGACAACAG CGAGCGCCCT
GCATCGGTAC TGATTGGCCA GCTGCGTGAT CACCTGGCCA GTGGCTGGAA ACTGGCAGGC
GAAGCCGACC CTGACAGCAA ACTGGACGAC GGCGAACGTC TTCTGAAAGC ACTGACGGTG
CATCACCCGC TGCAGCCGTT CAGCGCCAAT TACTTTCATG CAGGCACCGG CTACTTCAGC
TTCGCCCGCG AATGGCGCCT GCTGCATGAA ACCGACCTCC AGGTGCCCGT GCCTCAAGCG
CTTCCCCCTC ACGAGCAGGA AGAGCCACTG TCGATTGCGC AATTGCAGGA CTTCCTGCGA
AACCCGGTAA AGCACTTTTT CAGCCAGCGC CTGAAGATCT ATTTCGAGGT CGCCGAAGCG
CCGCTCGCTG ATGAAGAACC GTTCGTGCTC GACGCCCTTG AGCGCTACGG CCTCAGTGAA
AGCCTGCTCA ACGCGGCGAT GGTTTCCCCT GACAATAGTG ATGTCGCCCT GAAAGCCCAG
GCTCTGAAAC TGCAAGCCAG CGGCCTGCTG CCTCTCGCCG GGTTCGGCAC CTGCATGCAG
GACGAACTGA TCGAGCCCTT GCCGGACGTG CTCAGGCGCT ACCACGATCT GCTGACGCTG
TGGCCCGAAA CCTTGAGCAG TGCCTTGCCG ATCAGTTTCA GCCACCGTGG CGTCAGCATC
GACGGCTGGC TTGGCGGGTT ACACCGCAAC ACTCGCGGCG AGCTATTGCT GGTCACGGCG
ATTCCCAACA GCATTGGCTC TAAAAAGACC CGTAAGTGGC ATCGACTGAT TCGCCCGTGG
GTGAATCATC TGGTGGCCTG CGCCTGTGAG CTGCCATTGA GCACCGCGCT GGTGGCCAGT
GACGAAACCC TGATGCTCGA CCCGCTGGAA AAAGATGCTG CCATCACCAC GCTGAACCAC
CTGCTGATGG CCTGGCTGCG CGGCATGCAA CAACCGCTGC CGGTGGCCGT CAAAACCGCA
TTTGCCTGGC TGGGCCAACC CGCCGACAAA GCCGAAGCCG CCGCTCGCAA AGCCTACGAA
GGTGACGGGC AGACCACCGA TGGCGAACGA CGCGAAAGCA CCGCGCTGGC CCGGCAGTTT
GCGGACTTCG ACGCCTTGAT GGACAGCGAG GAATTCGCGG GCTGGTGCGA GACACTCTAC
AAGCCGATTT ACGACGCGCC CTGGCAGTCG TTGTCTGGCG GGGAGGGTGG CGCATGA
 
Protein sequence
MSVTTPLSAG FMVVQGNRPD ELRSLVVSWM RRYPLAPLEN EIALVQSNGI AQWLKLALAE 
DAQDDDNGGC GIAAAIDVQL PGSFMWTLYR RVLGSDEIPQ TSLLDKTPLT WRLMRLLPAL
INQPHFEPLQ RFLTDDTDLR KRYQLSERLS DLFDQYQVYR ADWLEDWAAG LHQLRDARGQ
PRPLSTANCW QAELWRALLD DVGAKGMAQS RAGVHRRFIE RIGTMTEAPP GLPSRVIVFG
ISSLPAQALE ALAGLAKFSQ VLLCVHNPCR HHWTDIVADK DLLRHQYKRQ ARKTGMPMIL
DPQALHQHAH PLLAAWGKQG RDYINLLDSH DDPRSYRSSF KDERIDLFSE VEPTNLLNQL
QDDILELRPL DETREIWPAI DPLEDRSLRF HVAHSAQREV EVLHDQLLAR FSKDPNLRPR
DVIVMVPDID SYAPHIRAVF GQIEREDRRF IPFTLADQGQ RGREPLLIAV EHLLKLPDSR
FPVSEILDLL DVPALRARFR IQERDLPTLH RWIEGAGIRW GLNAQQRAGL GLPDALEQNS
WHFGLRRMLL GYAVGAGTAY DGIEPYDEIG GLDAALIGPL VALIDGLQVA HTELSTPATP
EQWGARLQAI LQLFFIAESE HDDYLLAQLE TLRENWLETC AAVNLIDELP LTVVREAWLA
GLDQGRLSQR FLAGSVNFCT LMPMRAIPFK VVCLLGMNDG DYPRAQPPLD FDLMGSDYRP
GDRSRREDDR YLLLEAVLSA RDQLYVSWVG RSIRDNSERP ASVLIGQLRD HLASGWKLAG
EADPDSKLDD GERLLKALTV HHPLQPFSAN YFHAGTGYFS FAREWRLLHE TDLQVPVPQA
LPPHEQEEPL SIAQLQDFLR NPVKHFFSQR LKIYFEVAEA PLADEEPFVL DALERYGLSE
SLLNAAMVSP DNSDVALKAQ ALKLQASGLL PLAGFGTCMQ DELIEPLPDV LRRYHDLLTL
WPETLSSALP ISFSHRGVSI DGWLGGLHRN TRGELLLVTA IPNSIGSKKT RKWHRLIRPW
VNHLVACACE LPLSTALVAS DETLMLDPLE KDAAITTLNH LLMAWLRGMQ QPLPVAVKTA
FAWLGQPADK AEAAARKAYE GDGQTTDGER RESTALARQF ADFDALMDSE EFAGWCETLY
KPIYDAPWQS LSGGEGGA