Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0776 |
Symbol | recC |
ID | 1182401 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 832977 |
End bp | 836453 |
Gene Length | 3477 bp |
Protein Length | 1158 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637392156 |
Product | exodeoxyribonuclease V, gamma subunit |
Protein accession | NP_790623 |
Protein GI | 28868004 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1330] Exonuclease V gamma subunit |
TIGRFAM ID | [TIGR01450] exodeoxyribonuclease V, gamma subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGTTA CAACCCCGCT GAGTGCAGGT TTCATGGTGG TTCAAGGCAA CCGCCCGGAT GAACTGCGCA GTCTGGTTGT GTCCTGGATG CGTCGCTATC CCCTGGCACC GCTTGAGAAC GAGATTGCGC TGGTGCAGAG CAACGGCATT GCGCAATGGC TCAAACTTGC GCTGGCTGAA GACGCTCAGG ACGATGACAA CGGCGGCTGC GGCATTGCGG CTGCGATAGA TGTTCAGCTC CCTGGCAGTT TCATGTGGAC GCTGTATCGC AGGGTCCTCG GCAGCGATGA AATTCCTCAG ACGTCTCTGC TCGACAAGAC CCCGCTGACC TGGCGCTTGA TGCGCTTGCT TCCCGCACTG ATCAATCAGC CCCACTTCGA GCCACTGCAG CGCTTTCTGA CCGACGACAC CGACCTGCGC AAGCGCTATC AATTATCCGA ACGCTTGTCT GATCTGTTCG ACCAATATCA GGTCTATCGC GCTGACTGGC TGGAAGACTG GGCCGCAGGC CTACACCAAT TGCGCGACGC ACGAGGTCAG CCACGGCCCT TGTCCACTGC CAATTGCTGG CAGGCCGAGT TATGGCGCGC ACTGCTGGAT GATGTCGGAG CCAAGGGCAT GGCCCAGAGC CGTGCTGGCG TGCACCGGCG GTTTATCGAG CGCATTGGCA CCATGACCGA AGCGCCGCCT GGCTTGCCAT CGCGGGTAAT CGTATTCGGC ATATCGTCAC TCCCGGCGCA GGCGCTGGAA GCACTGGCCG GCTTGGCGAA GTTCAGCCAG GTGCTGCTCT GTGTGCACAA CCCCTGCCGT CACCACTGGA CCGACATCGT CGCTGACAAG GACCTGCTGC GTCATCAGTA CAAGCGTCAG GCCCGCAAGA CCGGTATGCC GATGATCCTC GATCCGCAAG CGCTGCATCA GCATGCGCAT CCGCTGCTCG CTGCCTGGGG AAAGCAGGGC CGTGATTACA TCAACCTGCT GGACAGCCAT GACGATCCGC GCAGCTATCG TTCGTCATTC AAGGACGAGC GGATTGACCT GTTCAGTGAG GTCGAGCCAA CCAATCTGCT GAACCAGTTG CAGGACGATA TTCTCGAACT GCGCCCGCTG GATGAAACGC GGGAGATATG GCCAGCCATT GACCCGCTTG AAGACCGCTC GCTCCGGTTT CACGTTGCCC ACAGCGCGCA GCGTGAAGTG GAAGTGCTGC ATGACCAGCT CCTGGCGCGG TTCAGCAAAG ACCCCAACCT GCGCCCGCGT GATGTGATTG TCATGGTTCC GGACATCGAC AGCTACGCGC CACACATTCG CGCTGTCTTC GGCCAGATCG AACGCGAAGA TCGCCGTTTT ATTCCCTTCA CGCTGGCCGA TCAGGGGCAA CGTGGTCGTG AGCCATTGCT GATCGCTGTC GAGCATCTGC TTAAGCTCCC CGACAGCCGC TTCCCGGTCA GCGAAATTCT CGACCTGCTG GACGTTCCGG CCTTGCGAGC GCGCTTTCGC ATTCAGGAGC GCGATCTGCC AACCCTGCAT CGCTGGATTG AAGGCGCAGG CATCCGCTGG GGCCTCAATG CGCAGCAACG CGCCGGTCTG GGGTTGCCGG ATGCGCTGGA ACAGAACAGC TGGCACTTCG GCCTGCGCCG CATGTTGCTA GGTTACGCTG TGGGTGCCGG TACCGCTTAT GACGGCATTG AGCCCTACGA CGAGATCGGC GGGCTGGATG CTGCATTGAT AGGCCCGCTG GTAGCGTTGA TCGATGGGCT GCAGGTTGCC CATACAGAGC TGTCCACGCC CGCCACCCCG GAGCAATGGG GCGCACGCTT GCAAGCCATT CTCCAGCTGT TCTTCATTGC TGAAAGCGAG CATGACGACT ACCTGCTTGC TCAGCTCGAA ACACTGCGTG AAAACTGGCT GGAAACCTGT GCAGCGGTAA ACCTGATTGA TGAGCTGCCG CTGACCGTGG TCCGTGAGGC CTGGCTTGCC GGGCTTGATC AGGGCCGCTT GTCTCAGCGT TTTCTGGCAG GCTCGGTCAA CTTCTGCACG TTGATGCCCA TGCGCGCCAT CCCGTTCAAA GTGGTCTGCC TGTTGGGCAT GAACGATGGC GATTACCCGC GCGCGCAACC CCCGCTGGAC TTCGACCTGA TGGGCAGTGA TTACCGCCCC GGTGACCGTT CGCGTCGTGA AGATGACCGT TATCTGTTGC TCGAAGCCGT GCTCTCGGCG CGGGATCAAC TGTACGTCAG CTGGGTTGGC CGCAGCATTC GTGACAACAG CGAGCGCCCT GCATCGGTAC TGATTGGCCA GCTGCGTGAT CACCTGGCCA GTGGCTGGAA ACTGGCAGGC GAAGCCGACC CTGACAGCAA ACTGGACGAC GGCGAACGTC TTCTGAAAGC ACTGACGGTG CATCACCCGC TGCAGCCGTT CAGCGCCAAT TACTTTCATG CAGGCACCGG CTACTTCAGC TTCGCCCGCG AATGGCGCCT GCTGCATGAA ACCGACCTCC AGGTGCCCGT GCCTCAAGCG CTTCCCCCTC ACGAGCAGGA AGAGCCACTG TCGATTGCGC AATTGCAGGA CTTCCTGCGA AACCCGGTAA AGCACTTTTT CAGCCAGCGC CTGAAGATCT ATTTCGAGGT CGCCGAAGCG CCGCTCGCTG ATGAAGAACC GTTCGTGCTC GACGCCCTTG AGCGCTACGG CCTCAGTGAA AGCCTGCTCA ACGCGGCGAT GGTTTCCCCT GACAATAGTG ATGTCGCCCT GAAAGCCCAG GCTCTGAAAC TGCAAGCCAG CGGCCTGCTG CCTCTCGCCG GGTTCGGCAC CTGCATGCAG GACGAACTGA TCGAGCCCTT GCCGGACGTG CTCAGGCGCT ACCACGATCT GCTGACGCTG TGGCCCGAAA CCTTGAGCAG TGCCTTGCCG ATCAGTTTCA GCCACCGTGG CGTCAGCATC GACGGCTGGC TTGGCGGGTT ACACCGCAAC ACTCGCGGCG AGCTATTGCT GGTCACGGCG ATTCCCAACA GCATTGGCTC TAAAAAGACC CGTAAGTGGC ATCGACTGAT TCGCCCGTGG GTGAATCATC TGGTGGCCTG CGCCTGTGAG CTGCCATTGA GCACCGCGCT GGTGGCCAGT GACGAAACCC TGATGCTCGA CCCGCTGGAA AAAGATGCTG CCATCACCAC GCTGAACCAC CTGCTGATGG CCTGGCTGCG CGGCATGCAA CAACCGCTGC CGGTGGCCGT CAAAACCGCA TTTGCCTGGC TGGGCCAACC CGCCGACAAA GCCGAAGCCG CCGCTCGCAA AGCCTACGAA GGTGACGGGC AGACCACCGA TGGCGAACGA CGCGAAAGCA CCGCGCTGGC CCGGCAGTTT GCGGACTTCG ACGCCTTGAT GGACAGCGAG GAATTCGCGG GCTGGTGCGA GACACTCTAC AAGCCGATTT ACGACGCGCC CTGGCAGTCG TTGTCTGGCG GGGAGGGTGG CGCATGA
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Protein sequence | MSVTTPLSAG FMVVQGNRPD ELRSLVVSWM RRYPLAPLEN EIALVQSNGI AQWLKLALAE DAQDDDNGGC GIAAAIDVQL PGSFMWTLYR RVLGSDEIPQ TSLLDKTPLT WRLMRLLPAL INQPHFEPLQ RFLTDDTDLR KRYQLSERLS DLFDQYQVYR ADWLEDWAAG LHQLRDARGQ PRPLSTANCW QAELWRALLD DVGAKGMAQS RAGVHRRFIE RIGTMTEAPP GLPSRVIVFG ISSLPAQALE ALAGLAKFSQ VLLCVHNPCR HHWTDIVADK DLLRHQYKRQ ARKTGMPMIL DPQALHQHAH PLLAAWGKQG RDYINLLDSH DDPRSYRSSF KDERIDLFSE VEPTNLLNQL QDDILELRPL DETREIWPAI DPLEDRSLRF HVAHSAQREV EVLHDQLLAR FSKDPNLRPR DVIVMVPDID SYAPHIRAVF GQIEREDRRF IPFTLADQGQ RGREPLLIAV EHLLKLPDSR FPVSEILDLL DVPALRARFR IQERDLPTLH RWIEGAGIRW GLNAQQRAGL GLPDALEQNS WHFGLRRMLL GYAVGAGTAY DGIEPYDEIG GLDAALIGPL VALIDGLQVA HTELSTPATP EQWGARLQAI LQLFFIAESE HDDYLLAQLE TLRENWLETC AAVNLIDELP LTVVREAWLA GLDQGRLSQR FLAGSVNFCT LMPMRAIPFK VVCLLGMNDG DYPRAQPPLD FDLMGSDYRP GDRSRREDDR YLLLEAVLSA RDQLYVSWVG RSIRDNSERP ASVLIGQLRD HLASGWKLAG EADPDSKLDD GERLLKALTV HHPLQPFSAN YFHAGTGYFS FAREWRLLHE TDLQVPVPQA LPPHEQEEPL SIAQLQDFLR NPVKHFFSQR LKIYFEVAEA PLADEEPFVL DALERYGLSE SLLNAAMVSP DNSDVALKAQ ALKLQASGLL PLAGFGTCMQ DELIEPLPDV LRRYHDLLTL WPETLSSALP ISFSHRGVSI DGWLGGLHRN TRGELLLVTA IPNSIGSKKT RKWHRLIRPW VNHLVACACE LPLSTALVAS DETLMLDPLE KDAAITTLNH LLMAWLRGMQ QPLPVAVKTA FAWLGQPADK AEAAARKAYE GDGQTTDGER RESTALARQF ADFDALMDSE EFAGWCETLY KPIYDAPWQS LSGGEGGA
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