| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0746 |
|---|
| Symbol | |
|---|
| ID | 1182366 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | + |
|---|
| Start bp | 792708 |
|---|
| End bp | 794105 |
|---|
| Gene Length | 1398 bp |
|---|
| Protein Length | 465 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637392121 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_790593 |
|---|
| Protein GI | 28867974 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGAAAATC ATTTCAAATT TCTGACCTTG CCCAAGACCT CGGGCGAGGT CGCCAACGTC
TTCATTCATG GCTACTCCTC AGGGCACGAT CTGGATGACC GGCGCATGCT GGCCAGCAGC
ATTCCCGCAG CCTTGCGCCA CAGCGTGAAT ATCCTCGCCT TTTGGCCGTC GAGCCATTTC
ACCCAGATGG ATAACCGCTC CCGTGGCCTG CTGATGGCCG CCGCTCGTGT GCATCCGCTG
GCCGGTGCGG CTGCGCTGGC GGGGGACCGT GTGGTTCATT TCGCGCGCAT CCGCAATCGT
GCCCGCGACA TGGGCAAGGT GCTGCTGACG CAACTGGACC GCTACCTGTT CGAGCATCAT
CCGCAGGTAA AGCGCGTCAA CCTGATCGGC CATTCACTGG GTGGCCGGCT GTTGGTCAGC
GCACTCAAAA ACGCCGAGCA ACCCCTGGAA CACGGCCTGG TCGTGGGTGA TGTGCTGCTG
ATGGCCGCAG CGGTGCGCCT CAATGCCACC GAGGCCGAGC AGCTCAAACA AAGCATCAGC
GGGCGGCTGA TCAACGCTTA TTCCAGCGAA GACCACGTGT TGCTGCTGAA CCTGGGCGAG
AAAAGCCTGG GGCGCACGCC GGTCGAGCAT TTTGAAAATG TGCGCATGGC GGGGTATCGC
CATCACCATT ACTGGCGCCG TTTGCAGGAA GTGCTGATCG CGACCGGTTT CAGTGGGTGT
GAAGGGTTGG AAACGGGTGT CGCGGTTTTG CCCGTGGCGA CCCGCGACCC GATCTTGCAG
GACGCCTTGC TGCACGACGT GCTGGCGCGC TCGCCGGATC ACTTGCTGGA CGCGGCGATC
AGGCATTTGC GCAGCAGCCG CTGGACCCGC CTGCACGATG CCGAAGCAGA CCGTGCCTAT
GCATTCGTGC GCGAATTCCA ACTGGTCGCC GGACATTTTC TGGTCAACGC CGCACGTCGT
CGAGGCGTGC CCTATACCCG AGCGCTGGGC ATGCTGGCGC GGCAATACGG CCTGGACGAC
GCGCTGCACC AGTGCGCCAC GGTGGTCGAG GTGGAAGAAC TGCTGCTCAG AACGTTCTTT
CGCCATGCGT TCAACAGTGC GCACCCGCTG GTGCAGATGC CCCGCGCCAG TGTCAGAGCG
ATGAGTTGGG AGGTGTACGC CGCGCATGTC GATACGCTGG CCGAGCGCCT GACCGTTGCT
GCGTTTTTCA AGCCGGCGCA GTCCGAAAAA GCCCCCGGCA GGCTCAAAGG GTTATTGGGT
GCCATTCGCC AGGCGCCGGT GCAGCGCTTG CTGACGCATT TTGGTACGGC GCTCAGGCCA
GGTTATTCGG CGTTGATCCC AACCGTGGCC ATCGTCTTTT ACGCGCGCGT CATGCTGGAC
GATGACGCGC TGATGTAA
|
|---|
| Protein sequence | MENHFKFLTL PKTSGEVANV FIHGYSSGHD LDDRRMLASS IPAALRHSVN ILAFWPSSHF
TQMDNRSRGL LMAAARVHPL AGAAALAGDR VVHFARIRNR ARDMGKVLLT QLDRYLFEHH
PQVKRVNLIG HSLGGRLLVS ALKNAEQPLE HGLVVGDVLL MAAAVRLNAT EAEQLKQSIS
GRLINAYSSE DHVLLLNLGE KSLGRTPVEH FENVRMAGYR HHHYWRRLQE VLIATGFSGC
EGLETGVAVL PVATRDPILQ DALLHDVLAR SPDHLLDAAI RHLRSSRWTR LHDAEADRAY
AFVREFQLVA GHFLVNAARR RGVPYTRALG MLARQYGLDD ALHQCATVVE VEELLLRTFF
RHAFNSAHPL VQMPRASVRA MSWEVYAAHV DTLAERLTVA AFFKPAQSEK APGRLKGLLG
AIRQAPVQRL LTHFGTALRP GYSALIPTVA IVFYARVMLD DDALM
|
|---|
| |