| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0743 |
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| Symbol | |
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| ID | 1182363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 789523 |
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| End bp | 790878 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637392118 |
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| Product | oxidoreductase, short chain dehydrogenase/reductase family |
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| Protein accession | NP_790590 |
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| Protein GI | 28867971 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGTCAG ATCGCTATAT TGATTTCGCC AATTCCGACA TGGGTCGGCG TCTGGTGAAC
GCCGTCGGTC TGCCCGCCCC CACCCACCTG GAGCGCTGGC AGGCCGGGCG TTTGCGCCCG
GTCGAAGGCA CCCTGCTGAT CAGCGCCGGG CCGCTGGGCG ATCAGGTCAG GCAGTTCGCC
AGCCGCCTGA CCGACTCGCT TTACAGCTTC GGCAGCGAGA TGCCCGGCGC AACCGCCTGG
GTCGCCAATC AGGGGCCGCG CCTGAAAGCA GTGGTCTTTG ACGCCAGTCA GATTCTGCGT
ACCGAGCAGC TCAGACAGCT CCGGGATTTC TTTCAACCGT TGCTGCGCAA CCTCGACCAC
TGTGCACACG TGGTGATTCT TGGCCGCGCA CCGGAGACGC TCGACGACCC GCTGGCGGCC
AGCACGCAGC AAGCCATCGT GGGCTTCAGC CGCTCGCTGG CCAAGGAAGT GCGCAACGGT
GCGACGGTCA AGCTGTTGCA GGTGGACGAA GACGCGCAGG ACCAACTGGA GGGCGCATTG
CGCTTTTTCC TGACCCCCAA GGCGGCATTC ATCTCCGGTC AGTTTGTCCA TTTGAGCGCC
TGCCCGAGCA AAGTGCAGGA CTGGACGCGC CCACTGGCCG GGCGCAAAGC CGTCGTGACC
GGTGCCGCGC GGGGCATCGG CGCCTCGATT GCCGAAACCC TGACCCGCGA TGGCGCACAG
GTCATTTTGC TGGACGTGCC GCAAACCCGC AAAGAACTGG AAGCACTGGC CTCGCGGCTC
GGTGGTCAGG CCCTGGCGCT AAATATCTGC GCGGCGGATG CACCTGCGCA ACTGCTTGAA
CACCTGCCCG ATGGCGTCGA CATTCTGGTG CACAACGCAG GCATCACCCG CGACAAGACG
CTGGCCAATA TGCCGGAAGA TTTCTGGGAC TCGGTGCTGG CCGTCAACCT TGGCGCGCCG
CAAGTGCTCA CTCAGGTGCT GCTTGATGGC GGCGCGCTGA AAGACAACGC CCGAATCGTG
CTCATGGCCT CGATCAGCGG CATCGCCGGT AATCGCGGGC AAACCAACTA CACCACCAGC
AAGGCCGGCC TGATCGGCTT TGCCAAGGCC ATGGCGCCAG GGCTCAAGGC CCGCGGCATC
AGCATCAACG CTGTTGCGCC GGGTTTCATC GAAACGAAAA TGACCGCCCA CATGCCGTTC
ACCTTGCGTG AAGCGGGCCG GCGCATGAGT TCGCTGGGCC AGGGCGGTAC GCCACAGGAT
GTCGCAGAAG CGGTGGCGTG GTTCAGCCAG CCGGGCAGCG GCGCCGTCAG TGGCCAGGTT
TTACGCGTAT GTGGTCAAAA CGTGATCGGG GCCTGA
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| Protein sequence | MPSDRYIDFA NSDMGRRLVN AVGLPAPTHL ERWQAGRLRP VEGTLLISAG PLGDQVRQFA
SRLTDSLYSF GSEMPGATAW VANQGPRLKA VVFDASQILR TEQLRQLRDF FQPLLRNLDH
CAHVVILGRA PETLDDPLAA STQQAIVGFS RSLAKEVRNG ATVKLLQVDE DAQDQLEGAL
RFFLTPKAAF ISGQFVHLSA CPSKVQDWTR PLAGRKAVVT GAARGIGASI AETLTRDGAQ
VILLDVPQTR KELEALASRL GGQALALNIC AADAPAQLLE HLPDGVDILV HNAGITRDKT
LANMPEDFWD SVLAVNLGAP QVLTQVLLDG GALKDNARIV LMASISGIAG NRGQTNYTTS
KAGLIGFAKA MAPGLKARGI SINAVAPGFI ETKMTAHMPF TLREAGRRMS SLGQGGTPQD
VAEAVAWFSQ PGSGAVSGQV LRVCGQNVIG A
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