Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0742 |
Symbol | |
ID | 1182362 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 788635 |
End bp | 789492 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637392117 |
Product | MaoC-like domain protein |
Protein accession | NP_790589 |
Protein GI | 28867970 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2030] Acyl dehydratase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.81902 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACGGCTC ATTGGCGCTA CCTCAATTCG CTACAACCGC TGTCCAACCT GTTCATTCAG GCGGCGCTCA GGCGCAAGGT AACCGGCACA CAGCTACCCG ATCTTGGGTT GCGCAGCTGG ATCGCGGTCG ATAACGACAA GCTTGAAGCG TACCGCAAGG TCTGTGGGTT TGCAGACAGC AGCCTGCTGC CGCCGACTTA CCCGCATGCG CTGGCTTTTA CGTTGCAGAT GCAATTGATG ACCTCACCGG AGTTTCCCTT CCCGCTGCTG GGGCTCATTC ATCTGGGCAA TCAGATTCGC ACCCTTCGCC CGCTCGGCGG CGTGAGCCAG TTGTACATCA GCGTGCAGGC CACCGACCTG CGCCCGCACC CCAAAGGCGC GACGTTTACC TTGCTCACGC AGGCCGAGGA CGGAATGGGC CTGCTATGGG AAGAAGAAAG CACTCTGCTG TGCACCGCCG TTCATCTTGA GGACGCGCCT GTTCCAATGC CCGAAGCGTA CCTGCGACCG CTCATCGAGC TGGACCGCTG GCGGGCGTCT GCACAGATCG GCCGCGAGTA CGCCAAGGTG TCTGGCGACT ACAACCCGAT TCACCTCAGC GCCGCCAGCG CCAAGCTATT CGGCTTCCCA CGCGCCATTG CCCACGGCAT GTGGCTCAAG GCACGTGCGC TCGCAGCACT GGAAGATCAC CTGCCCGCCT CGAACGTCCA GATCAGCGTG CAGTTCCAGA AACCGGTACG CCTGCCCGCC GATGTCACGC TGTCGGCCAG CGCCGCCGGT TCCCACGGTG AGTTTCGTGT CGAAGGCCAG GAAGGTATCG TGCACATGAT CGGTAGCTGG CAACCGGCTA CGGATTGA
|
Protein sequence | MTAHWRYLNS LQPLSNLFIQ AALRRKVTGT QLPDLGLRSW IAVDNDKLEA YRKVCGFADS SLLPPTYPHA LAFTLQMQLM TSPEFPFPLL GLIHLGNQIR TLRPLGGVSQ LYISVQATDL RPHPKGATFT LLTQAEDGMG LLWEEESTLL CTAVHLEDAP VPMPEAYLRP LIELDRWRAS AQIGREYAKV SGDYNPIHLS AASAKLFGFP RAIAHGMWLK ARALAALEDH LPASNVQISV QFQKPVRLPA DVTLSASAAG SHGEFRVEGQ EGIVHMIGSW QPATD
|
| |