| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0740 |
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| Symbol | smtA |
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| ID | 1182360 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 787469 |
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| End bp | 788134 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637392115 |
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| Product | smtA protein |
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| Protein accession | NP_790587 |
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| Protein GI | 28867968 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.867796 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGTTGCAGG CCGATCTGAC CGAGACGCTG CCCAAGCGGC CGTTGCGTGT GCTGGATATC
GGCGCGGGGT TGGGGCATAT GTCGCTGTGG CTGGCCGAGC AAGGTCATGA GGTGACGCTG
GCCGAGCCCG CCGAGCCCAT GCTTGAAGGC GCACGTCAGC GTTTTGCCGA CGCCGGACAG
ACGGCAACCT TCATTCAGGC CCCGTGGCAG ACGCTGCCCG ACTTACTGAG CGACACTTAC
GATGTGGTGC TGTGCCACGC CGTGCTGGAA TGGCTGGCCG AGCCGTACTC GATTCTTCCG
GTGCTGCGCA GGCTCACCCA GGACGATGGC TGGCTGTCGC TGGCGTTTTA CAACCGCGAT
GCGCTGATTT ATCGCAACTT GCTCAAGGGC CATTTCCGCA AGATGCGTAA AAACGACATG
GCCGGAGAAA AGCAGAGCCT GACGCCCCAG CAACCGCTCG ACCCTCGGGA ACTCGCGACG
CAACTTGAAG GGCTGTGGCA AGTCGAAACC CGTAGCGGCG TGCGGGTGTT TCACGATTAC
ATGCCGCTTG AATTCCAGGC CCGGGCCGAG CTGACGGAAC TGCTGGAAAT GGAGCTGGCG
CATCGACGTC ATCCGGCGTT TGCCGGGCTG GGTCGATACC TGCACTGGAT GTGCCGTCCG
GTCTGA
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| Protein sequence | MLQADLTETL PKRPLRVLDI GAGLGHMSLW LAEQGHEVTL AEPAEPMLEG ARQRFADAGQ
TATFIQAPWQ TLPDLLSDTY DVVLCHAVLE WLAEPYSILP VLRRLTQDDG WLSLAFYNRD
ALIYRNLLKG HFRKMRKNDM AGEKQSLTPQ QPLDPRELAT QLEGLWQVET RSGVRVFHDY
MPLEFQARAE LTELLEMELA HRRHPAFAGL GRYLHWMCRP V
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