Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0733 |
Symbol | |
ID | 1182353 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 781888 |
End bp | 783615 |
Gene Length | 1728 bp |
Protein Length | 575 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637392108 |
Product | MORN repeat family protein |
Protein accession | NP_790580 |
Protein GI | 28867961 |
COG category | [S] Function unknown |
COG ID | [COG4642] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0236191 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGCGCGC TTGCTCCATT GGCTTTGACA CTCTTGATCG CAGGCTGCGG TGATGGCGAA TCACTTTTGC CGCCAGACGG CCGCCTGCCC GATGGCGGAC GCTACCGTGG CGACGTGGTC AACGGACTGT TGCAAGGCGA GGGGCGGATC GACTACCCCA ACGGCAGGTG GTACGCCGGC CAGTTTGTAA ACGGGCTGTG GCAAGGTCAG GGGGAATGGC ACGCCAGCAA TGGCGACGTC TATAAAGGCA GCTTCGAGCA GGGCCTGTAT CAAGGCCAGG GTCGACTGAC CACGCGCAAT GGCGCGAGTT ATGTCGGCAA TTTCAAACTC GGTCTGCGTG ACGGCGAAGG GACGCAAAAA GACAAGGGCG TGCTTTACCG TGGCCAGTTC AAGGCAGACC AGTACGACGG CCCCGGACGT CTGGAACTGG AAGACGGCAG CCAGCACCAG GGCATGTTCG CCAAAGGTAA GGCCAATGGT GAAGGCTCGC GCAGTGATGC CAGCGGCAAT CAATACAGCG GTAACTTCGT CGACGGCCAG TTGCAGGGCA CCGGCAGCTT CACCAGCGCG GAAGGCGACC AATATGTCGG CAATTTCCGC AACAGCCAGC TGGACGGCCA GGGCCGCTAC GAAAACAGCG ACGGCGACGT CTGGAGCGGT GAGTTCAAGG AAGGCGCACT GACCGGCAAA GGCGAGCTGA TCGGCTCGGA CGGCAGCCGC TATCAGGGCG ACTTCGATAA CTGGCGCTTC ATGGGCCAGG GTCAGTTGCA ACTGGCTGAT GGCAGTCGTT ACGTCGGCCA GTTCGCCGAT GACACCTATC AGGGCAACGG CGTACTGACC GCCCCGGATG GCAAGGAACA GCGCGGCATC TGGGCCAATG GTCAGCGGGT ACGTGACGCC AAGGGCAAAT TGCTGCCCGA CGTGCTTGAA GCCGGGTTGC TTGCGCAGGG CACTTTGCTG GACAAGGCGC TCGCCGCCGT GCCTGCATCG ACACCGGCTA CCGAACTGTA CACGCTGGTG GTGGCCGGCG ACGGCAAGCA GAGCGTGTTC ATGCGCGAAG CGGACTACGT CAGCAATTTG CTGAAATCGC GTTTTGGCGC CATTGGCCAG GTCGGCCTGG TCAATCATCG CGATCACATG GATGACCGGC CGATGGCCAC CCGCGAAACC ATCACCCGCG CAGTGCAGAC CCTTGCACAG CGCACCGGCC CGGAAGACCT GGTGTTCATT TACCTGACCA GCCACGGCAC CCAGGACCAT GAACTGGTAC TCGACCAACC GCGCCTGTCG CTGGCTGATC TGCCTGCTGA CGCGCTGGCT GCCGCCCTCG CCCCGCTGAA AAATCGCGAT AAGGTCGTGG TCATTTCGGC CTGTTATTCC GGCGGCTTCA TTCCGGACCT CAAGGACGAG CGCACCCTGG TCATGACCGC CTCCCGCGCC GACCGGGTGT CCTTCGGTTG CTCGGAAGAA GCCGACTTCA CTTATTTTGG CGATGCACTA TTTGCCAAGG CATTGGTCGA AACCGATGAC CTGCAACAAG CATTCAATGA AGCAAAAGCC TATGTCGCCC AACGTGAGAC CGAAGACAAT TTCGAAGCCT CCGAGCCGCA GATATGGGCA CCAAAAGGAG TTCTGGCGCG CTGGCAGCAA TTGCGCAAAA GCCAGGCCGA ACGCGCTTTG AATACGGCGT TGAACCGCAC GGAAGCGAAG ACCTCGACTA GCCGCTAG
|
Protein sequence | MRALAPLALT LLIAGCGDGE SLLPPDGRLP DGGRYRGDVV NGLLQGEGRI DYPNGRWYAG QFVNGLWQGQ GEWHASNGDV YKGSFEQGLY QGQGRLTTRN GASYVGNFKL GLRDGEGTQK DKGVLYRGQF KADQYDGPGR LELEDGSQHQ GMFAKGKANG EGSRSDASGN QYSGNFVDGQ LQGTGSFTSA EGDQYVGNFR NSQLDGQGRY ENSDGDVWSG EFKEGALTGK GELIGSDGSR YQGDFDNWRF MGQGQLQLAD GSRYVGQFAD DTYQGNGVLT APDGKEQRGI WANGQRVRDA KGKLLPDVLE AGLLAQGTLL DKALAAVPAS TPATELYTLV VAGDGKQSVF MREADYVSNL LKSRFGAIGQ VGLVNHRDHM DDRPMATRET ITRAVQTLAQ RTGPEDLVFI YLTSHGTQDH ELVLDQPRLS LADLPADALA AALAPLKNRD KVVVISACYS GGFIPDLKDE RTLVMTASRA DRVSFGCSEE ADFTYFGDAL FAKALVETDD LQQAFNEAKA YVAQRETEDN FEASEPQIWA PKGVLARWQQ LRKSQAERAL NTALNRTEAK TSTSR
|
| |