Gene PSPTO_0732 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0732 
Symbol 
ID1182352 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp781219 
End bp781860 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content62% 
IMG OID637392107 
Producthypothetical protein 
Protein accessionNP_790579 
Protein GI28867960 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0702] Predicted nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.387844 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATTTGA CGCCGCAACA TATTCTGCTC GCCGGGGCCA CCGGCCTTAC CGGTGAGCAT 
TTGCTTGATC GCCTGCTTAA CGAGCCGACT GTCAGCCGAG TATTGGCACC GACGCGCAGG
CCACTGGCGG AACACCCTCA CCTGGAAAAC CCGGTCGGCG AACTGACCAC CTTGCTGCCC
TTGCTGGGTG GCCGTGTGGA CATCGCCTTC TGCTGCCTTG GCACCACCAT CAAACAGGCC
GGCTCGCAGG ATGCTTTCAA GGCGGTCGAT CTGGACCTGG TGCTGGCGTT CGCCACTCGC
GCCCTTGAGC TGGGTGCGCG TCATTTGCTG GTGATCAGTG CAATTGGTGC TGACCCGAAA
TCGAGCACGT TCTACAACCG CATCAAAGGC GAGATGGAAC AGGCCCTGCG CGCGCAAGAC
TGGCCGCAAC TGACCATCGC CCGCCCGTCA CTGCTGGTGG GCAGCCGTAC AGAAACCCGC
TGGGTCGAAC AACTGGCCGC GCCTATTGCC AAGCTGCTCC CCGGCAAATA CGGCGCAATC
GAAGCCTGCC AACTCGCCCG CGCCATGTGG CGCCTGGCGC TGGAAGAGCA GAATGGTGTG
CGGATTGTCG AGTCGGATGA GCTGCGTAAG CTGGGGAAAT AG
 
Protein sequence
MYLTPQHILL AGATGLTGEH LLDRLLNEPT VSRVLAPTRR PLAEHPHLEN PVGELTTLLP 
LLGGRVDIAF CCLGTTIKQA GSQDAFKAVD LDLVLAFATR ALELGARHLL VISAIGADPK
SSTFYNRIKG EMEQALRAQD WPQLTIARPS LLVGSRTETR WVEQLAAPIA KLLPGKYGAI
EACQLARAMW RLALEEQNGV RIVESDELRK LGK