Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0732 |
Symbol | |
ID | 1182352 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 781219 |
End bp | 781860 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637392107 |
Product | hypothetical protein |
Protein accession | NP_790579 |
Protein GI | 28867960 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.387844 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTATTTGA CGCCGCAACA TATTCTGCTC GCCGGGGCCA CCGGCCTTAC CGGTGAGCAT TTGCTTGATC GCCTGCTTAA CGAGCCGACT GTCAGCCGAG TATTGGCACC GACGCGCAGG CCACTGGCGG AACACCCTCA CCTGGAAAAC CCGGTCGGCG AACTGACCAC CTTGCTGCCC TTGCTGGGTG GCCGTGTGGA CATCGCCTTC TGCTGCCTTG GCACCACCAT CAAACAGGCC GGCTCGCAGG ATGCTTTCAA GGCGGTCGAT CTGGACCTGG TGCTGGCGTT CGCCACTCGC GCCCTTGAGC TGGGTGCGCG TCATTTGCTG GTGATCAGTG CAATTGGTGC TGACCCGAAA TCGAGCACGT TCTACAACCG CATCAAAGGC GAGATGGAAC AGGCCCTGCG CGCGCAAGAC TGGCCGCAAC TGACCATCGC CCGCCCGTCA CTGCTGGTGG GCAGCCGTAC AGAAACCCGC TGGGTCGAAC AACTGGCCGC GCCTATTGCC AAGCTGCTCC CCGGCAAATA CGGCGCAATC GAAGCCTGCC AACTCGCCCG CGCCATGTGG CGCCTGGCGC TGGAAGAGCA GAATGGTGTG CGGATTGTCG AGTCGGATGA GCTGCGTAAG CTGGGGAAAT AG
|
Protein sequence | MYLTPQHILL AGATGLTGEH LLDRLLNEPT VSRVLAPTRR PLAEHPHLEN PVGELTTLLP LLGGRVDIAF CCLGTTIKQA GSQDAFKAVD LDLVLAFATR ALELGARHLL VISAIGADPK SSTFYNRIKG EMEQALRAQD WPQLTIARPS LLVGSRTETR WVEQLAAPIA KLLPGKYGAI EACQLARAMW RLALEEQNGV RIVESDELRK LGK
|
| |