Gene PSPTO_0727 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0727 
SymboleutB 
ID1182347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp775492 
End bp776886 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content62% 
IMG OID637392102 
Productethanolamine ammonia-lyase, heavy subunit 
Protein accessionNP_790574 
Protein GI28867955 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4303] Ethanolamine ammonia-lyase, large subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAGCT TTTCCCATTC TGTCGGTGCG CAGACGTACC GCTTCGACAG CCTCAAAGAA 
GTCATGGCCA AGGCCAGCCC CGCGCGTTCC GGTGATTATC TGGCCGAAGT CGCGGCGCAA
AATGATGCCG AGCGGGTTGC CGCGCAAATG GCGCTGGCCA ATATTCCCCT TAAGCATTTT
CTTGAAGAAG CTCTGATCCC TTACGAACAG GACGAAGTCA CCCGCCTGAT CATCGACACC
CACGACAAAC TGACCTTCGC GCCGGTCAGC CACCTGACCG TCGGCGGTTT TCGTGACTGG
TTGCTCAGCG ATCAGGCCGA CGAAACCAGC CTGCGCGCGC TGGCGCCGGG CCTGACGCCC
GAGATGGCGG CTGCCGTTTC AAAAATCATG CGCGTGCAGG ATCTGATCCT GGTGGCGCAG
AAGATCCGCG TCGTCACCCG CTTTCGCAAC ACCATGGGCC TGCGTGGCCG GCTGTCTACC
CGTTTGCAAC CTAATCACCC GACTGACGAC CCATCCGGGA TTGCCGCCAG CGTGCTGGAC
GGCCTGCTGT ACGGCAACGG CGATGCCATG ATCGGCATCA ACCCGGCTAC CGACAGCACC
TCAAGCATCG TCGCGCTGCT GGAGATGCTC GACGCCATCA TCCAGCGCTA TGACATCCCG
ACCCAGTCCT GCGTGCTGAC CCACGTCACC ACCTCCATCG AGGTGATCAA CCGTGGCGTG
CCGGTCGATC TGGTCTTCCA GTCGATCACC GGTACGGAAG CCGCCAACGC CAGCTTCGGC
ATCAACCTCA AGCTGCTGCA GGAAGGCTAT GAAGCAGGGC TGAGCCTGAA CCGCGGTACC
CTCGGGCAAA ACCTGATGTA TTTCGAGACC GGTCAGGGCA GCGCGCTCTC GGCCAACGCC
CATCACGGCG TCGACCAACA GACCTGCGAA ACCCGCGCCT ACGCCGTCGC CCGGCATTTC
AACCCGTTTC TGGTCAATAC CGTGGTCGGT TTCATCGGCC CGGAGTACCT GTACAACGGC
AAGCAGATCA TTCGCGCCGG CCTGGAGGAT CATTTCTGCG GCAAGTTGCT GGGCGTGCCG
ATGGGCTGCG ACATCTGTTA CACCAACCAC GCCGAAGCCG ATCAGGACGA CATGGACACC
CTGCTGACAC TGCTGGGCGT CGCCGGCATC AATTTCATCA TGGGCATCCC CGGCTCCGAC
GACATCATGC TCAACTACCA GACCACCTCG TTCCACGACG CGCTATACGC CCGCCAGAGC
CTGGGCCTGC GTCCGGCACC GGAATACGAA GCCTGGCTGG AGAAAATGGG CATCTTCACT
CAGACAGACG GCCGCGTTCG CTTCGGTGAC AGCCTGCCGC CTGCCTTTCG TCAGGCACTG
GCGCACCTCG CATGA
 
Protein sequence
MASFSHSVGA QTYRFDSLKE VMAKASPARS GDYLAEVAAQ NDAERVAAQM ALANIPLKHF 
LEEALIPYEQ DEVTRLIIDT HDKLTFAPVS HLTVGGFRDW LLSDQADETS LRALAPGLTP
EMAAAVSKIM RVQDLILVAQ KIRVVTRFRN TMGLRGRLST RLQPNHPTDD PSGIAASVLD
GLLYGNGDAM IGINPATDST SSIVALLEML DAIIQRYDIP TQSCVLTHVT TSIEVINRGV
PVDLVFQSIT GTEAANASFG INLKLLQEGY EAGLSLNRGT LGQNLMYFET GQGSALSANA
HHGVDQQTCE TRAYAVARHF NPFLVNTVVG FIGPEYLYNG KQIIRAGLED HFCGKLLGVP
MGCDICYTNH AEADQDDMDT LLTLLGVAGI NFIMGIPGSD DIMLNYQTTS FHDALYARQS
LGLRPAPEYE AWLEKMGIFT QTDGRVRFGD SLPPAFRQAL AHLA