Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0721 |
Symbol | |
ID | 1182341 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 770709 |
End bp | 771440 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637392096 |
Product | transcriptional regulator, putative |
Protein accession | NP_790568 |
Protein GI | 28867949 |
COG category | [K] Transcription |
COG ID | [COG2932] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATACAT CAGGCGATCG ACTCCGCATC CTCCTTCGAG AGTGCCACCT CACCGCGACT GACTTTGCCG CCAACCGCAA AATCACGCCG CAACACGTCA ATAACTGGTT CAAACGCGGC GTACCCATGG CGCGGATTGA CGAGGTGGCT GAACTATTAA CCGTCAACGC CCGTTGGCTG CGCAGCGGCG ACGGGCCCAA ACACCCCAAT GAATCGGCCA ATGAAAACAC CGGTGACGAC AAACGGATGG CCATCCAGCA AACAAGAAAC GTACTGCGCG GCGACGTGGA AATTCAGATC TACATGGAAG TCGAATCCCC CCACGGCGTC GGTAAAACCG TGCTGTCCGA AGCCCCCGGA CAAAAAATCC GCCTGCCCCT GCAAGTGTTG CAAACCATGG GCATCGACCC GAAAAATTGC ATGTGCGTCG CCATGGTCGG CAACAGCATG GCCGACAAAA TCCAGGACGG CTCGATCCTC GGCGTCGATC GAGAACTGAC CCAAGTCATC GACGGCGAAA TCTACGCCCT CGAACACGGC GGCATCCTGC GCGTGCGCTA CCTCTACCGC CTCCCCAACG GCGGCCTGCG CCTGCGCAGC CACAACGACG CCGAATACCC GGACGAAGTA TTCAGCGGCG AGGACATTGC CAGGGAAAAG ATCCGGATTC TAGGATGGAT ATTCTGGTGG TCGACACTGA ACAGCCGGCG CAATGCGATG CTGTTGTTGT GA
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Protein sequence | MNTSGDRLRI LLRECHLTAT DFAANRKITP QHVNNWFKRG VPMARIDEVA ELLTVNARWL RSGDGPKHPN ESANENTGDD KRMAIQQTRN VLRGDVEIQI YMEVESPHGV GKTVLSEAPG QKIRLPLQVL QTMGIDPKNC MCVAMVGNSM ADKIQDGSIL GVDRELTQVI DGEIYALEHG GILRVRYLYR LPNGGLRLRS HNDAEYPDEV FSGEDIAREK IRILGWIFWW STLNSRRNAM LLL
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