Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0702 |
Symbol | |
ID | 1182322 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 755088 |
End bp | 756107 |
Gene Length | 1020 bp |
Protein Length | 339 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637392077 |
Product | hypothetical protein |
Protein accession | NP_790549 |
Protein GI | 28867930 |
COG category | [S] Function unknown |
COG ID | [COG4804] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATACTC CCAACGTACC GCAGGCACCC GCAAGTGATC GCTTCGATGA AGTGCTCGCC ATGATTCAGG GCGCTCGACA GCAGGCAGCG CAGGCGGTCA ACACGCGTCT GATCGAGCTG TACTGGCAAG TCGGCGCCTA CATCAGTCGC AAGATTGAAA ACGCTGAATG GGGCGATGCA GTGGTCAGCC AGCTTGCCGA GCACCTGGCT ACCACCCAAC CGGGGCTGCG CGGGTTTACA CGTCGAAATC TGTTTCGCAT GCGCCAGTTT TTCGAGGCTT ACCGGGGCGA TGAGAAAGTG TCAGCAGTGC TGACACAATT GCCGTGGACT CATCACTTGA TCATTTTCAG TCAAAGCAAG CGACCCGAAG AACGTGAGTT TTACTTGCGT ATGGCTATCA GGGAAAAATG GTCCAGCCGC GAACTGGAAC GCCAATTCAA AACCGCCTTG TTCGAACGCA CTGTCACCCA GCCAGCCAAA GCCTCGGCCA TGCTCAAGGA AACCCGGCCG GCCGCACTGG AGGTGTTTCG TGATGCCTAC ATGGTGGAGT TTCTGGAGCT GTCTGCCGGA CATGCCGAGG CGGACCTGCA TCGCGGCTTG CTGCAACGCC TGAGGGATTT TCTGATCGAA CTGGGTCGTG ACTTCTGCTT TGTCGGCTCC GAGTACCCGG TGCAGGTGGG TGGCCAGGAT TTCGCCCTGG ACCTGCTGTT TTTCCATCGT GGCCTCAACT GCCTTGTTGC CATCGAACTC AAGGTCGGAC GCTTTGAGCC TGAGTACCTG GGCAAACTGA ACTTCTATCT GGAAGCACTG GACCAGACCG AGCGCAAACC CCATGAAAGC CCCGCCATTG GCGTGCTGTT GTGCGCCAGC AAAAACGATG AAGTGGTCGA GTACGCGCTG AACCGCTCGT TGTCACCGGC ACTGATTGCC GAATACCAGA CCCGACTGCC GGACAGGCAA TTGCTACAGG CCAAACTGCA CGAGTTTTAC GCACTGGACA TAGCGAAGAA CGATCAGTAA
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Protein sequence | MNTPNVPQAP ASDRFDEVLA MIQGARQQAA QAVNTRLIEL YWQVGAYISR KIENAEWGDA VVSQLAEHLA TTQPGLRGFT RRNLFRMRQF FEAYRGDEKV SAVLTQLPWT HHLIIFSQSK RPEEREFYLR MAIREKWSSR ELERQFKTAL FERTVTQPAK ASAMLKETRP AALEVFRDAY MVEFLELSAG HAEADLHRGL LQRLRDFLIE LGRDFCFVGS EYPVQVGGQD FALDLLFFHR GLNCLVAIEL KVGRFEPEYL GKLNFYLEAL DQTERKPHES PAIGVLLCAS KNDEVVEYAL NRSLSPALIA EYQTRLPDRQ LLQAKLHEFY ALDIAKNDQ
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