Gene PSPTO_0702 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0702 
Symbol 
ID1182322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp755088 
End bp756107 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content57% 
IMG OID637392077 
Producthypothetical protein 
Protein accessionNP_790549 
Protein GI28867930 
COG category[S] Function unknown 
COG ID[COG4804] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATACTC CCAACGTACC GCAGGCACCC GCAAGTGATC GCTTCGATGA AGTGCTCGCC 
ATGATTCAGG GCGCTCGACA GCAGGCAGCG CAGGCGGTCA ACACGCGTCT GATCGAGCTG
TACTGGCAAG TCGGCGCCTA CATCAGTCGC AAGATTGAAA ACGCTGAATG GGGCGATGCA
GTGGTCAGCC AGCTTGCCGA GCACCTGGCT ACCACCCAAC CGGGGCTGCG CGGGTTTACA
CGTCGAAATC TGTTTCGCAT GCGCCAGTTT TTCGAGGCTT ACCGGGGCGA TGAGAAAGTG
TCAGCAGTGC TGACACAATT GCCGTGGACT CATCACTTGA TCATTTTCAG TCAAAGCAAG
CGACCCGAAG AACGTGAGTT TTACTTGCGT ATGGCTATCA GGGAAAAATG GTCCAGCCGC
GAACTGGAAC GCCAATTCAA AACCGCCTTG TTCGAACGCA CTGTCACCCA GCCAGCCAAA
GCCTCGGCCA TGCTCAAGGA AACCCGGCCG GCCGCACTGG AGGTGTTTCG TGATGCCTAC
ATGGTGGAGT TTCTGGAGCT GTCTGCCGGA CATGCCGAGG CGGACCTGCA TCGCGGCTTG
CTGCAACGCC TGAGGGATTT TCTGATCGAA CTGGGTCGTG ACTTCTGCTT TGTCGGCTCC
GAGTACCCGG TGCAGGTGGG TGGCCAGGAT TTCGCCCTGG ACCTGCTGTT TTTCCATCGT
GGCCTCAACT GCCTTGTTGC CATCGAACTC AAGGTCGGAC GCTTTGAGCC TGAGTACCTG
GGCAAACTGA ACTTCTATCT GGAAGCACTG GACCAGACCG AGCGCAAACC CCATGAAAGC
CCCGCCATTG GCGTGCTGTT GTGCGCCAGC AAAAACGATG AAGTGGTCGA GTACGCGCTG
AACCGCTCGT TGTCACCGGC ACTGATTGCC GAATACCAGA CCCGACTGCC GGACAGGCAA
TTGCTACAGG CCAAACTGCA CGAGTTTTAC GCACTGGACA TAGCGAAGAA CGATCAGTAA
 
Protein sequence
MNTPNVPQAP ASDRFDEVLA MIQGARQQAA QAVNTRLIEL YWQVGAYISR KIENAEWGDA 
VVSQLAEHLA TTQPGLRGFT RRNLFRMRQF FEAYRGDEKV SAVLTQLPWT HHLIIFSQSK
RPEEREFYLR MAIREKWSSR ELERQFKTAL FERTVTQPAK ASAMLKETRP AALEVFRDAY
MVEFLELSAG HAEADLHRGL LQRLRDFLIE LGRDFCFVGS EYPVQVGGQD FALDLLFFHR
GLNCLVAIEL KVGRFEPEYL GKLNFYLEAL DQTERKPHES PAIGVLLCAS KNDEVVEYAL
NRSLSPALIA EYQTRLPDRQ LLQAKLHEFY ALDIAKNDQ