| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0699 |
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| Symbol | ispA |
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| ID | 1182319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 752619 |
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| End bp | 753506 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637392074 |
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| Product | geranyltranstransferase |
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| Protein accession | NP_790546 |
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| Protein GI | 28867927 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGCGA GCTATCAAGC GCAAAGCCAG ACTCGCGTCA ATGCAGCACT CGAAGGCTTG
TTTCAGGCAC CGAGCCCTGA GCTGAGCCGC CTCTACGAGG CCATGCGTTA CAGCGTGATG
AACGGTGGCA AACGTGTGCG CCCGCTGCTG GCCTACGCCG CCTGTGAAGC ACTGGGCGGC
GTGGCCGAAG ATGCCAATGG CGCGGCCTGT GCGGTCGAGC TGATCCATGC TTACTCACTG
GTGCACGACG ATTTGCCGGC GATGGACGAT GACGACCTGC GTCGCGGCCA GCCGACCACC
CATAAGGCGT TCGATGAGGC CTGCGCGATC CTCGCCGGTG ACGGCCTGCA AAGCCTCGCT
TTCACCGCCT TGCTCGCCCC GCACCTGAGC TCGCGTAACG CCGCAACCCG ATTGCAGATG
GTCAGCACAC TGGCCGCTGC CGCAGGTCCG GCCGGAATGG TGGGCGGACA GGCCATCGAT
CTGGGTTCGG TAGGACTAAA GCTGGATCAG GCTGCGCTGG AATACATGCA CCGTCACAAG
ACCGGCGCGT TGATCGAAGC CAGTGTTCGG CTCGGAGCCC TGGCCAGCGG TCAGGCCGAT
CAGGCGCGGC TCGATGCCCT GCAGGTCTAT GCACGTGCGG TCGGTCTGGC CTTTCAGGTT
CAAGACGACA TTCTCGACGT CGAAAGCGAT ACCGCGACCC TCGGCAAGCG CCAGGGTGCC
GACATCGCCC GCGACAAACC GACCTACCCC GCACTGCTGG GCCTGGACGC GGCCAAGGGC
TATGCCCTGG AATTGCGCGA TCAGGCGCTC GCTGCGCTGA GTCTTTTCGA CACCACGGCA
GAGCCGTTGC GCGAGTTGGC GCGGTACATC GTCGAGCGCC GTCACTGA
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| Protein sequence | MIASYQAQSQ TRVNAALEGL FQAPSPELSR LYEAMRYSVM NGGKRVRPLL AYAACEALGG
VAEDANGAAC AVELIHAYSL VHDDLPAMDD DDLRRGQPTT HKAFDEACAI LAGDGLQSLA
FTALLAPHLS SRNAATRLQM VSTLAAAAGP AGMVGGQAID LGSVGLKLDQ AALEYMHRHK
TGALIEASVR LGALASGQAD QARLDALQVY ARAVGLAFQV QDDILDVESD TATLGKRQGA
DIARDKPTYP ALLGLDAAKG YALELRDQAL AALSLFDTTA EPLRELARYI VERRH
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